RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 CCNOP22674 350 aa16.79■□□□□ 0.28
CCDC40-206ENST00000572083 RBMXP38159 391 aaKnown RBP16.79■□□□□ 0.28
CCDC40-206ENST00000572083 MPV17P39210 176 aa16.79■□□□□ 0.28
CCDC40-206ENST00000572083 CDH12P55289 794 aa16.79■□□□□ 0.28
CCDC40-206ENST00000572083 FADDQ13158 208 aa16.79■□□□□ 0.28
CCDC40-206ENST00000572083 DHRS4L2Q6PKH6 230 aa16.79■□□□□ 0.28
CCDC40-206ENST00000572083 RBM15BQ8NDT2 890 aaKnown RBP16.79■□□□□ 0.28
CCDC40-206ENST00000572083 OR9I1Q8NGQ6 314 aa16.79■□□□□ 0.28
CCDC40-206ENST00000572083 OR1J2Q8NGS2 313 aa16.79■□□□□ 0.28
CCDC40-206ENST00000572083 IPCEF1Q8WWN9 437 aaPredicted RBP16.79■□□□□ 0.28
CCDC40-206ENST00000572083 GEMIN6Q8WXD5 167 aaKnown RBP16.79■□□□□ 0.28
CCDC40-206ENST00000572083 DCAF16Q9NXF7 216 aa16.79■□□□□ 0.28
CCDC40-206ENST00000572083 PPIAL4EA0A075B759 164 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 PPIAL4CA0A0B4J2A2 164 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 ZSCAN5BA6NJL1 495 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 PPIAL4DF5H284 164 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 TRAPPC2LH3BP13 241 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 CLIC1O00299 241 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 TM9SF1O15321 606 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 TPST2O60704 377 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 OR6A2O95222 327 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 PTHP01270 115 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 QDPRP09417 244 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 PGA4P0DJD7 388 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 PGA3P0DJD8 388 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 PPIAL4FP0DN26 164 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 BMP2P12643 396 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 APLNRP35414 380 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 MMP15P51511 669 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 PLP2Q04941 152 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 ZNF154Q13106 437 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 SPRNQ5BIV9 151 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 CEP85LQ5SZL2 805 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 MSANTD1Q6ZTZ1 278 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 ZNF101Q8IZC7 436 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 LRRC18Q8N456 261 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 TMEM43Q9BTV4 400 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 PAIP1Q9H074 479 aaKnown RBP16.78■□□□□ 0.28
CCDC40-206ENST00000572083 SLITRK2Q9H156 845 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 LRMDAQ9H2I8 198 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 NPHS2Q9NP85 383 aa16.78■□□□□ 0.28
CCDC40-206ENST00000572083 PLSCR5A0PG75 271 aa16.77■□□□□ 0.28
CCDC40-206ENST00000572083 RNF13O43567 381 aa16.77■□□□□ 0.28
CCDC40-206ENST00000572083 MT-ATP6P00846 226 aa16.77■□□□□ 0.28
CCDC40-206ENST00000572083 IGHMP01871 453 aa16.77■□□□□ 0.28
CCDC40-206ENST00000572083 KITP10721 976 aa16.77■□□□□ 0.28
CCDC40-206ENST00000572083 OMGP23515 440 aa16.77■□□□□ 0.28
CCDC40-206ENST00000572083 GCH1P30793 250 aa16.77■□□□□ 0.28
CCDC40-206ENST00000572083 SEC61A1P61619 476 aaKnown RBP16.77■□□□□ 0.28
CCDC40-206ENST00000572083 HSF2Q03933 536 aa16.77■□□□□ 0.28
CCDC40-206ENST00000572083 SLC3A1Q07837 685 aa16.77■□□□□ 0.28
CCDC40-206ENST00000572083 SLC9A3R2Q15599 337 aa16.77■□□□□ 0.28
CCDC40-206ENST00000572083 THEM4Q5T1C6 240 aa16.77■□□□□ 0.28
CCDC40-206ENST00000572083 SLC2A7Q6PXP3 512 aa16.77■□□□□ 0.28
CCDC40-206ENST00000572083 DPPA2Q7Z7J5 298 aa16.77■□□□□ 0.28
CCDC40-206ENST00000572083 C10orf111Q8N326 155 aa16.77■□□□□ 0.28
CCDC40-206ENST00000572083 GTF2H4Q92759 462 aa16.77■□□□□ 0.28
CCDC40-206ENST00000572083 SLC25A44Q96H78 314 aaPredicted RBP16.77■□□□□ 0.28
CCDC40-206ENST00000572083 RAD21L1Q9H4I0 556 aa16.77■□□□□ 0.28
CCDC40-206ENST00000572083 ZIM2Q9NZV7 527 aa16.77■□□□□ 0.28
CCDC40-206ENST00000572083 IGHV3OR16-10A0A075B7F0 116 aa16.76■□□□□ 0.27
CCDC40-206ENST00000572083 HDAC3O15379 428 aa16.76■□□□□ 0.27
CCDC40-206ENST00000572083 IGHV2-70P01814 119 aa16.76■□□□□ 0.27
CCDC40-206ENST00000572083 WNT5AP41221 380 aa16.76■□□□□ 0.27
CCDC40-206ENST00000572083 POLR2JP52435 117 aaKnown RBP16.76■□□□□ 0.27
CCDC40-206ENST00000572083 SRSF4Q08170 494 aaKnown RBP16.76■□□□□ 0.27
CCDC40-206ENST00000572083 JAZF1Q86VZ6 243 aa16.76■□□□□ 0.27
CCDC40-206ENST00000572083 SYT14Q8NB59 555 aa16.76■□□□□ 0.27
CCDC40-206ENST00000572083 CPEB3Q8NE35 698 aaKnown RBP16.76■□□□□ 0.27
CCDC40-206ENST00000572083 DCLRE1CQ96SD1 692 aaKnown RBP16.76■□□□□ 0.27
CCDC40-206ENST00000572083 PAIP2Q9BPZ3 127 aaKnown RBP16.76■□□□□ 0.27
CCDC40-206ENST00000572083 SPATA5L1Q9BVQ7 753 aa16.76■□□□□ 0.27
CCDC40-206ENST00000572083 EGLN1Q9GZT9 426 aa16.76■□□□□ 0.27
CCDC40-206ENST00000572083 MS4A7Q9GZW8 240 aaPredicted RBP16.76■□□□□ 0.27
CCDC40-206ENST00000572083 TAS2R5Q9NYW4 299 aa16.76■□□□□ 0.27
CCDC40-206ENST00000572083 TRIM33Q9UPN9 1127 aa16.76■□□□□ 0.27
CCDC40-206ENST00000572083 NPTNQ9Y639 398 aa16.76■□□□□ 0.27
CCDC40-206ENST00000572083 SOX21Q9Y651 276 aaPredicted RBP16.76■□□□□ 0.27
CCDC40-206ENST00000572083 TRPC5OSA6NMA1 111 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 GPANK1O95872 356 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 MMP7P09237 267 aaPredicted RBP16.75■□□□□ 0.27
CCDC40-206ENST00000572083 SBK2P0C263 348 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 ZNF12P17014 697 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 HOXB9P17482 250 aaPredicted RBP16.75■□□□□ 0.27
CCDC40-206ENST00000572083 PCGF2P35227 344 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 CLRN1P58418 232 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 MPP2Q14168 576 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 ZNF718Q3SXZ3 478 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 KRT71Q3SY84 523 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 PABPC1L2AQ5JQF8 200 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 GCNT6Q5T4J0 391 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 REEP3Q6NUK4 255 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 SPATC1Q76KD6 591 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 RANBP3LQ86VV4 465 aaPredicted RBP16.75■□□□□ 0.27
CCDC40-206ENST00000572083 KRT73Q86Y46 540 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 SLC25A40Q8TBP6 338 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 TMIGD2Q96BF3 282 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 MARS2Q96GW9 593 aaKnown RBP16.75■□□□□ 0.27
CCDC40-206ENST00000572083 ZNF347Q96SE7 839 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 MRI1Q9BV20 369 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms