RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 MCOLN3Q8TDD5 553 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 CHPT1Q8WUD6 406 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 ANKRD49Q8WVL7 239 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 IFT81Q8WYA0 676 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 PINX1Q96BK5 328 aaKnown RBP4.01□□□□□ -1.77
LINC00254-201ENST00000563416 RAB39BQ96DA2 213 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 OR4K3Q96R72 315 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 CYTH2Q99418 400 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 S1PR3Q99500 378 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 SELENOSQ9BQE4 189 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 DPH7Q9BTV6 452 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 DERL2Q9GZP9 239 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 HOXD1Q9GZZ0 328 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 PCBD2Q9H0N5 130 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 GORASP2Q9H8Y8 452 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 WDR76Q9H967 626 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 CAB39LQ9H9S4 337 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 MRPS30Q9NP92 439 aaKnown RBP4.01□□□□□ -1.77
LINC00254-201ENST00000563416 B3GAT2Q9NPZ5 323 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 YAE1D1Q9NRH1 226 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 NMRK1Q9NWW6 199 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 NDE1Q9NXR1 346 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 SMPD3Q9NY59 655 aaPredicted RBP4.01□□□□□ -1.77
LINC00254-201ENST00000563416 EURLQ9NYK6 297 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 TAC3Q9UHF0 121 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 ATP6V1HQ9UI12 483 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 PRDM4Q9UKN5 801 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 PLCL2Q9UPR0 1127 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 OARD1Q9Y530 152 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 GCN1Q92616 2671 aaKnown RBP4.01□□□□□ -1.77
LINC00254-201ENST00000563416 SPTA1P02549 2419 aa4.01□□□□□ -1.77
LINC00254-201ENST00000563416 FREM3P0C091 2139 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 ZGRF1Q86YA3 2104 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 LOC105371242A0A075B767 164 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 KCNE1BA0A087WTH5 132 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 A0A0U1RQV5 110 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 CCL24O00175 119 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 LGALS8O00214 317 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 CDC7O00311 574 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 SOCS3O14543 225 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 ANXA5P08758 320 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 HIST1H2AGP0C0S8 130 aaPredicted RBP4□□□□□ -1.77
LINC00254-201ENST00000563416 RHOXF2BP0C7M4 288 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 CCDC166P0CW27 439 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 TCN2P20062 427 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 GCAP28676 217 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 CRABP2P29373 138 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 PRDX2P32119 198 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 DUTP33316 252 aaKnown RBP4□□□□□ -1.77
LINC00254-201ENST00000563416 DLSTP36957 453 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 SERPINB9P50453 376 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 ATP6V0D1P61421 351 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 HERV-K104P63124 156 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 CSNK1G2P78368 415 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 CDC20Q12834 499 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 NCF4Q15080 339 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 TGFBIQ15582 683 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 OR4D1Q15615 310 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 PDK4Q16654 411 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 KRT71Q3SY84 523 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 CMPK2Q5EBM0 449 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 CDKL4Q5MAI5 379 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 FRMPD2BQ6IN97 320 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 CAPN13Q6MZZ7 669 aaPredicted RBP4□□□□□ -1.77
LINC00254-201ENST00000563416 FRRS1Q6ZNA5 592 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 COX15Q7KZN9 410 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 TRMT10CQ7L0Y3 403 aaKnown RBP4□□□□□ -1.77
LINC00254-201ENST00000563416 VN1R4Q7Z5H5 301 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 CMC1Q7Z7K0 106 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 P2RY8Q86VZ1 359 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 ZDHHC21Q8IVQ6 265 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 METTL4Q8N3J2 472 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 OR4C15Q8NGM1 316 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 OR13C2Q8NGS9 318 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 CT55Q8WUE5 264 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 DCAKDQ8WVC6 231 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4□□□□□ -1.77
LINC00254-201ENST00000563416 STARD8Q92502 1023 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 PIK3R3Q92569 461 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 KIAA1143Q96AT1 154 aaPredicted RBP4□□□□□ -1.77
LINC00254-201ENST00000563416 TM4SF19Q96DZ7 209 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 OMA1Q96E52 524 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 CATSPER2Q96P56 530 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 AGAP4Q96P64 663 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 OR2A5Q96R48 311 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 RHOXF2Q9BQY4 288 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 NLNQ9BYT8 704 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 SLC26A1Q9H2B4 701 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 MTHFD2LQ9H903 347 aaPredicted RBP4□□□□□ -1.77
LINC00254-201ENST00000563416 VIPAS39Q9H9C1 493 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 GPN2Q9H9Y4 310 aaPredicted RBP4□□□□□ -1.77
LINC00254-201ENST00000563416 UTP6Q9NYH9 597 aaKnown RBP4□□□□□ -1.77
LINC00254-201ENST00000563416 BCAP29Q9UHQ4 241 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 ELF5Q9UKW6 265 aaPredicted RBP4□□□□□ -1.77
LINC00254-201ENST00000563416 ZNF490Q9ULM2 529 aaPredicted RBP4□□□□□ -1.77
LINC00254-201ENST00000563416 MRPS18BQ9Y676 258 aaKnown RBP4□□□□□ -1.77
LINC00254-201ENST00000563416 HELZ2Q9BYK8 2649 aaKnown RBP4□□□□□ -1.77
LINC00254-201ENST00000563416 TENM4Q6N022 2769 aa4□□□□□ -1.77
LINC00254-201ENST00000563416 UBR5O95071 2799 aaPredicted RBP3.99□□□□□ -1.77
LINC00254-201ENST00000563416 IGLV3-12A0A075B6K2 115 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms