RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 OR51A7Q8NH64 312 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 ASB10Q8WXI3 467 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 TMEM54Q969K7 222 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 TXNDC15Q96J42 360 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 EMC6Q9BV81 110 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 MRPL13Q9BYD1 178 aaKnown RBP12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 ESRP2Q9H6T0 727 aaKnown RBP12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 GPR35Q9HC97 309 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 GRHPRQ9UBQ7 328 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 TRAV27A0A087WT01 109 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 ARPC4-TTLL3A0A0A6YYG9 625 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 PTP4A3O75365 173 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 ATP6V1B1P15313 513 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 EPHA2P29317 976 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 RPL4P36578 427 aaKnown RBP12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 ALDH3B2P48448 385 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 GSSP48637 474 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 CDH15P55291 814 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 CLRN1P58418 232 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 CTXN1P60606 82 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 COX10Q12887 443 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 NPRL3Q12980 569 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 CAMK2DQ13557 499 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 FHL1Q13642 323 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 SNTB1Q13884 538 aaKnown RBP12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 HIST2H2BCQ6DN03 193 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 PGBD2Q6P3X8 592 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 SMARCD3Q6STE5 483 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 KLHL17Q6TDP4 642 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 DPPA2Q7Z7J5 298 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 ADCK1Q86TW2 530 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 NOXO1Q8NFA2 376 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 MOSPD2Q8NHP6 518 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 HDAC2Q92769 488 aaKnown RBP12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 RADILQ96JH8 1075 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 TNFRSF13CQ96RJ3 184 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 DGCR6LQ9BY27 220 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 POLDIP3Q9BY77 421 aaKnown RBP12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 CLEC4MQ9H2X3 399 aaPredicted RBP12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 RIBC2Q9H4K1 309 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 NRIP3Q9NQ35 241 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 SLC17A5Q9NRA2 495 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 KIF17Q9P2E2 1029 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 MGAT4BQ9UQ53 548 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 HSPE1-MOB4S4R3N1 261 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 A0A087WXM4 84 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 M0R3G1 203 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 XKRYO14609 159 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 IMPA2O14732 288 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 IDH3BO43837 385 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 HRGP04196 525 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 THBDP07204 575 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 SDHAP31040 664 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 SLC6A6P31641 620 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 UBE2NP61088 152 aaKnown RBP12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 CEACAM16Q2WEN9 425 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 RBM48Q5RL73 367 aaKnown RBP12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 C6orf141Q5SZD1 244 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 THEM4Q5T1C6 240 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 CD300LDQ6UXZ3 194 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 TMEM200AQ86VY9 491 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 ARIH2OSQ8N7S6 290 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 OR9Q2Q8NGE9 314 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 FANK1Q8TC84 345 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 NANOS1Q8WY41 292 aaKnown RBP12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 RBP7Q96R05 134 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 FOXB1Q99853 325 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 NIPSNAP1Q9BPW8 284 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 PAPOLBQ9NRJ5 636 aaKnown RBP12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 FBXL3Q9UKT7 428 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 POFUT2Q9Y2G5 429 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 SLC25A15Q9Y619 301 aa12.27□□□□□ -0.45
PKNOX1-209ENST00000560448 DEFB108AA8MXU0 73 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 ARPC3O15145 178 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 DHHO43323 396 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 TRMUO75648 421 aaKnown RBP12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 FARS2O95363 451 aaKnown RBP12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 TXNDC12O95881 172 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 NPR2P20594 1047 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 CRHBPP24387 322 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 PTAFRP25105 342 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 ZNF84P51523 738 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 CDK5R2Q13319 367 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 MELKQ14680 651 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 TBRG1Q3YBR2 411 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 C10orf128Q5T292 105 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 CARD17Q5XLA6 110 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 TMEM108Q6UXF1 575 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 RASSF6Q6ZTQ3 369 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 LINGO2Q7L985 606 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 FAM122BQ7Z309 247 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 SATL1Q86VE3 508 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 PARP8Q8N3A8 854 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 SETD9Q8NE22 299 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 OR52L1Q8NGH7 329 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 ZNF519Q8TB69 540 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 BCL2L2Q92843 193 aaPredicted RBP12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 ZC3HAV1LQ96H79 300 aaKnown RBP12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 HRASLS5Q96KN8 279 aa12.26□□□□□ -0.45
PKNOX1-209ENST00000560448 SNX18Q96RF0 628 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms