RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 ALDH3B1P43353 468 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 GPR4P46093 362 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 SLC16A1P53985 500 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 RAP2BP61225 183 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 SIRPAP78324 504 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 FUT5Q11128 374 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 RUNX3Q13761 415 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 GPR176Q14439 515 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 FAM189A2Q15884 450 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 PRSS53Q2L4Q9 553 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 ZNF674Q2M3X9 581 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 POM121L1PQ3SYA9 428 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 LGALSLQ3ZCW2 172 aaPredicted RBP5.03□□□□□ -1.6
GABPB1-207ENST00000558335 C14orf28Q4W4Y0 310 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 ACSM3Q53FZ2 586 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 EOGTQ5NDL2 527 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 AGBL4Q5VU57 503 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 ZNF529Q6P280 563 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 TMEM71Q6P5X7 295 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 ARL9Q6T311 187 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 PAQR6Q6TCH4 344 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 ZNF793Q6ZN11 406 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 ZNF836Q6ZNA1 936 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 VRK2Q86Y07 508 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 SPICQ8N5J4 248 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 LINC01555Q8NAE3 123 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 OR4F15Q8NGB8 312 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 OR5M9Q8NGP3 310 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 OR4Q3Q8NH05 313 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 ZNF417Q8TAU3 575 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 ZDHHC1Q8WTX9 485 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 ZNF296Q8WUU4 475 aaPredicted RBP5.03□□□□□ -1.6
GABPB1-207ENST00000558335 SMIM4Q8WVI0 70 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 THAP4Q8WY91 577 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 SMPDL3BQ92485 455 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 DPF1Q92782 380 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 SLAMF9Q96A28 289 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 CMBLQ96DG6 245 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 RSPRY1Q96DX4 576 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 TM4SF19Q96DZ7 209 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 SPACA9Q96E40 222 aaPredicted RBP5.03□□□□□ -1.6
GABPB1-207ENST00000558335 MISP3Q96FF7 219 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 TRMT61AQ96FX7 289 aaKnown RBP5.03□□□□□ -1.6
GABPB1-207ENST00000558335 SLC35A4Q96G79 324 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 MARS2Q96GW9 593 aaKnown RBP5.03□□□□□ -1.6
GABPB1-207ENST00000558335 C5orf34Q96MH7 638 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 WDR92Q96MX6 357 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 OR1F2PQ96R84 312 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 INTS14Q96SY0 518 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 MAP3K3Q99759 626 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 PRRT1Q99946 306 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 ZFYVE21Q9BQ24 234 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 CMSS1Q9BQ75 279 aaKnown RBP5.03□□□□□ -1.6
GABPB1-207ENST00000558335 LMF2Q9BU23 707 aaKnown RBP5.03□□□□□ -1.6
GABPB1-207ENST00000558335 APOOQ9BUR5 198 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 LGR4Q9BXB1 951 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 CACNG6Q9BXT2 260 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 PCED1AQ9H1Q7 454 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 TSPAN10Q9H1Z9 355 aaPredicted RBP5.03□□□□□ -1.6
GABPB1-207ENST00000558335 SLCO5A1Q9H2Y9 848 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 RERGLQ9H628 205 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 EXO5Q9H790 373 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 ZFP64Q9NPA5 681 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 CHST11Q9NPF2 352 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 MEPEQ9NQ76 525 aaPredicted RBP5.03□□□□□ -1.6
GABPB1-207ENST00000558335 HINT3Q9NQE9 182 aaKnown RBP5.03□□□□□ -1.6
GABPB1-207ENST00000558335 SLC17A5Q9NRA2 495 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 SLC22A11Q9NSA0 550 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 POT1Q9NUX5 634 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 GAR1Q9NY12 217 aaKnown RBP5.03□□□□□ -1.6
GABPB1-207ENST00000558335 PRODH2Q9UF12 536 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 SLC23A2Q9UGH3 650 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 SERGEFQ9UGK8 458 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 GDF2Q9UK05 429 aaPredicted RBP5.03□□□□□ -1.6
GABPB1-207ENST00000558335 ZNF223Q9UK11 482 aaPredicted RBP5.03□□□□□ -1.6
GABPB1-207ENST00000558335 ZNF222Q9UK12 451 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 ING1Q9UK53 422 aaPredicted RBP5.03□□□□□ -1.6
GABPB1-207ENST00000558335 OR52A1Q9UKL2 312 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 DAPP1Q9UN19 280 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 RASD1Q9Y272 281 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 GPR52Q9Y2T5 361 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 MRPS18CQ9Y3D5 142 aaKnown RBP5.03□□□□□ -1.6
GABPB1-207ENST00000558335 ZNF337Q9Y3M9 751 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 NPTNQ9Y639 398 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 SLCO1B1Q9Y6L6 691 aa5.03□□□□□ -1.6
GABPB1-207ENST00000558335 PLXND1Q9Y4D7 1925 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 A0A0B4J2E0 115 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 KIR2DS5A0A0G2JLQ3 304 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 A0A0G2JNG1 304 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 TRBV2A0A0J9YWF9 115 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 A0A1B0GX12 115 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 TCRBV21S2A2A0A5A6 115 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 PRR19A6NJB7 356 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 CD8B2A6NJW9 211 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 FAM74A7A6NL05 159 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 SEC14L6B5MCN3 397 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 TMEM238C9JI98 176 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 J3QLW9 94 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms