RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 VBP1P61758 197 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 ERVK-25P63136 954 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 KDSRQ06136 332 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 ZFP36L1Q07352 338 aaKnown RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 PPIDQ08752 370 aaKnown RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 FADDQ13158 208 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 ITGB3BPQ13352 177 aaPredicted RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 LRRC36Q1X8D7 754 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 HSDL1Q3SXM5 330 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 TIMM50Q3ZCQ8 353 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 XKR4Q5GH76 650 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 OR2B11Q5JQS5 317 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 EOGTQ5NDL2 527 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 SAPCD1Q5SSQ6 148 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 ADAM5Q6NVV9 412 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 FAAP20Q6NZ36 180 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 C1orf94Q6P1W5 598 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 WDR74Q6RFH5 385 aaPredicted RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 UNQ9370/PRO34162Q6UXP9 181 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 COPS6Q7L5N1 327 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 BHLHA15Q7RTS1 189 aaPredicted RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 PPP1R27Q86WC6 154 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 RBM45Q8IUH3 476 aaKnown RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 APOBEC3FQ8IUX4 373 aaKnown RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF100Q8IYN0 542 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 LRRC34Q8IZ02 419 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 CMTM1Q8IZ96 169 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 IQCKQ8N0W5 287 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 PUSL1Q8N0Z8 303 aaKnown RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 KIR2DL5AQ8N109 375 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 PROKR2Q8NFJ6 384 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 OR7G1Q8NGA0 311 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 OR52E5Q8NH55 327 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 KIR2DL5BQ8NHK3 375 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF461Q8TAF7 563 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 SLC7A13Q8TCU3 470 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 AGAP11Q8TF27 550 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 RASL10AQ92737 203 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 SMARCD2Q92925 531 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 TOP1MTQ969P6 601 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 FGGYQ96C11 551 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 CCDC124Q96CT7 223 aaKnown RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 FAM122AQ96E09 287 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 ITCHQ96J02 903 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF599Q96NL3 588 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 APOL2Q9BQE5 337 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 PRRG3Q9BZD7 231 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 OR2AG1Q9H205 316 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 GBA3Q9H227 469 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 CWH43Q9H720 699 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 ISG20L2Q9H9L3 353 aaKnown RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 MRPL47Q9HD33 250 aaKnown RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 RETNQ9HD89 108 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF275Q9NSD4 429 aaPredicted RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 RBAKQ9NYW8 714 aaPredicted RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 KCNIP1Q9NZI2 227 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 IFNKQ9P0W0 207 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 STOX2Q9P2F5 926 aaPredicted RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 MYEF2Q9P2K5 600 aaKnown RBP2.4□□□□□ -2.03
TRAV28-201ENST00000557548 CLN8Q9UBY8 286 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 PSMD13Q9UNM6 376 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 FLVCR2Q9UPI3 526 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 PPIL1Q9Y3C6 166 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 PDS5BQ9NTI5 1447 aa2.4□□□□□ -2.03
TRAV28-201ENST00000557548 CCDC88BA6NC98 1476 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 BIVM-ERCC5R4GMW8 1640 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 CUX1P39880 1505 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 KCNE1BA0A087WTH5 132 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 IGHV7-81A0A0B4J1V7 117 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 A0A1W2PQ72 361 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 GOLGA8IPA6NC78 632 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 A8MUA0 341 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 SERPINE3A8MV23 424 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 SRRM5B3KS81 715 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 DYNC1I1O14576 645 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF354AO60765 605 aaPredicted RBP2.39□□□□□ -2.03
TRAV28-201ENST00000557548 TBL1XO60907 577 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 EEDO75530 441 aaKnown RBP2.39□□□□□ -2.03
TRAV28-201ENST00000557548 SCELO95171 688 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 ALDOBP05062 364 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 SERPINE2P07093 398 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 FOLR2P14207 255 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 CAPN2P17655 700 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 OR3A4PP47883 348 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 GDI2P50395 445 aaKnown RBP2.39□□□□□ -2.03
TRAV28-201ENST00000557548 CSNK1G2P78368 415 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 ACVR1Q04771 509 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 PDIA2Q13087 525 aaKnown RBP2.39□□□□□ -2.03
TRAV28-201ENST00000557548 CASP8Q14790 479 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 PON2Q15165 354 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 PRR4Q16378 134 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 C14orf177Q52M58 125 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 KLHL22Q53GT1 634 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 THEM4Q5T1C6 240 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 GPR157Q5UAW9 335 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 ANKRD26P1Q6NSI1 321 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 DCXRQ7Z4W1 244 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 LHFPL3Q86UP9 236 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 CYP4Z1Q86W10 505 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 LRRC8AQ8IWT6 810 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms