RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 RAD21L1Q9H4I0 556 aa10.42□□□□□ -0.74
SNX6-209ENST00000557265 ZMAT3Q9HA38 289 aaKnown RBP10.42□□□□□ -0.74
SNX6-209ENST00000557265 SSU72Q9NP77 194 aaKnown RBP10.42□□□□□ -0.74
SNX6-209ENST00000557265 MMP26Q9NRE1 261 aa10.42□□□□□ -0.74
SNX6-209ENST00000557265 SDR39U1Q9NRG7 319 aaPredicted RBP10.42□□□□□ -0.74
SNX6-209ENST00000557265 PLEK2Q9NYT0 353 aa10.42□□□□□ -0.74
SNX6-209ENST00000557265 ZIM2Q9NZV7 527 aa10.42□□□□□ -0.74
SNX6-209ENST00000557265 TESQ9UGI8 421 aaKnown RBP10.42□□□□□ -0.74
SNX6-209ENST00000557265 PURGQ9UJV8 347 aaKnown RBP10.42□□□□□ -0.74
SNX6-209ENST00000557265 NOTCH1P46531 2555 aa10.42□□□□□ -0.74
SNX6-209ENST00000557265 IQCMA0A1B0GVH7 501 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 TPST2O60704 377 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 MFN2O95140 757 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 RNASE1P07998 156 aaKnown RBP10.41□□□□□ -0.74
SNX6-209ENST00000557265 QDPRP09417 244 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 KITP10721 976 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 APLNRP35414 380 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 POLR2JP52435 117 aaKnown RBP10.41□□□□□ -0.74
SNX6-209ENST00000557265 CDK6Q00534 326 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 SLC3A1Q07837 685 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 HNRNPA0Q13151 305 aaKnown RBP10.41□□□□□ -0.74
SNX6-209ENST00000557265 MELKQ14680 651 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 KLF17Q5JT82 389 aaPredicted RBP10.41□□□□□ -0.74
SNX6-209ENST00000557265 CEP85LQ5SZL2 805 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 SPATA46Q5T0L3 261 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 GCNT6Q5T4J0 391 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 REEP3Q6NUK4 255 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 SLC2A7Q6PXP3 512 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 KRT73Q86Y46 540 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 RBM15BQ8NDT2 890 aaKnown RBP10.41□□□□□ -0.74
SNX6-209ENST00000557265 CPEB3Q8NE35 698 aaKnown RBP10.41□□□□□ -0.74
SNX6-209ENST00000557265 OR9I1Q8NGQ6 314 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 SLC25A28Q96A46 364 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 TRIM44Q96DX7 344 aaPredicted RBP10.41□□□□□ -0.74
SNX6-209ENST00000557265 SLC25A44Q96H78 314 aaPredicted RBP10.41□□□□□ -0.74
SNX6-209ENST00000557265 ZNF48Q96MX3 618 aaPredicted RBP10.41□□□□□ -0.74
SNX6-209ENST00000557265 TMEM109Q9BVC6 243 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 SPATA5L1Q9BVQ7 753 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 EGLN1Q9GZT9 426 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 KCNK9Q9NPC2 374 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 TAS2R5Q9NYW4 299 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 AUP1Q9Y679 476 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 VWFP04275 2813 aa10.41□□□□□ -0.74
SNX6-209ENST00000557265 PLSCR5A0PG75 271 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 PRORSD1PA6NEY8 169 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 RGS16O15492 202 aaPredicted RBP10.4□□□□□ -0.74
SNX6-209ENST00000557265 RNF13O43567 381 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 CH25HO95992 272 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 SBK2P0C263 348 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 PGA4P0DJD7 388 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 PGA3P0DJD8 388 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 CCNOP22674 350 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 GCH1P30793 250 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 MPV17P39210 176 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 MMP15P51511 669 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 VSNL1P62760 191 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 HSF2Q03933 536 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 ZNF154Q13106 437 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 ZNF718Q3SXZ3 478 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 KRT71Q3SY84 523 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 TMEM255AQ5JRV8 349 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 THEM4Q5T1C6 240 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 SWT1Q5T5J6 900 aaKnown RBP10.4□□□□□ -0.74
SNX6-209ENST00000557265 LEG1Q6P5S2 330 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 RANBP3LQ86VV4 465 aaPredicted RBP10.4□□□□□ -0.74
SNX6-209ENST00000557265 C10orf111Q8N326 155 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 LRRC18Q8N456 261 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 SYT14Q8NB59 555 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 DCLRE1CQ96SD1 692 aaKnown RBP10.4□□□□□ -0.74
SNX6-209ENST00000557265 SLITRK2Q9H156 845 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 NPHS2Q9NP85 383 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 SLC13A4Q9UKG4 626 aa10.4□□□□□ -0.74
SNX6-209ENST00000557265 ZSCAN5BA6NJL1 495 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 TRAPPC2LH3BP13 241 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 MMP7P09237 267 aaPredicted RBP10.39□□□□□ -0.75
SNX6-209ENST00000557265 HOXB9P17482 250 aaPredicted RBP10.39□□□□□ -0.75
SNX6-209ENST00000557265 MDKP21741 143 aaPredicted RBP10.39□□□□□ -0.75
SNX6-209ENST00000557265 STOMP27105 288 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 AQP1P29972 269 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 WNT5AP41221 380 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 ZNF84P51523 738 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 CLRN1P58418 232 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 SLC9A3R2Q15599 337 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 ZNF74Q16587 644 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 NRN1LQ496H8 165 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 SPRNQ5BIV9 151 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 PABPC1L2AQ5JQF8 200 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 HHATQ5VTY9 493 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 LINC00114Q6XXX2 140 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 ZNF101Q8IZC7 436 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 GOLGA6L1Q8N7Z2 621 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 AENQ8WTP8 325 aaKnown RBP10.39□□□□□ -0.75
SNX6-209ENST00000557265 IPCEF1Q8WWN9 437 aaPredicted RBP10.39□□□□□ -0.75
SNX6-209ENST00000557265 GEMIN6Q8WXD5 167 aaKnown RBP10.39□□□□□ -0.75
SNX6-209ENST00000557265 MCHR2Q969V1 340 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 MARS2Q96GW9 593 aaKnown RBP10.39□□□□□ -0.75
SNX6-209ENST00000557265 MAELQ96JY0 434 aaKnown RBP10.39□□□□□ -0.75
SNX6-209ENST00000557265 ZNF347Q96SE7 839 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 MCHR1Q99705 422 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 THAP1Q9NVV9 213 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms