RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 EFCAB7A8K855 629 aa13.51□□□□□ -0.25
CUX1-215ENST00000556210 MPZL1O95297 269 aa13.51□□□□□ -0.25
CUX1-215ENST00000556210 CAPZBP47756 277 aa13.51□□□□□ -0.25
CUX1-215ENST00000556210 GLO1Q04760 184 aa13.51□□□□□ -0.25
CUX1-215ENST00000556210 ALKBH1Q13686 389 aaKnown RBP13.51□□□□□ -0.25
CUX1-215ENST00000556210 ST3GAL2Q16842 350 aa13.51□□□□□ -0.25
CUX1-215ENST00000556210 Q499Y3 187 aa13.51□□□□□ -0.25
CUX1-215ENST00000556210 ZNF658BQ4V348 819 aaPredicted RBP13.51□□□□□ -0.25
CUX1-215ENST00000556210 ZNF440Q8IYI8 595 aa13.51□□□□□ -0.25
CUX1-215ENST00000556210 OR13C9Q8NGT0 318 aa13.51□□□□□ -0.25
CUX1-215ENST00000556210 ASB12Q8WXK4 309 aa13.51□□□□□ -0.25
CUX1-215ENST00000556210 PMM1Q92871 262 aa13.51□□□□□ -0.25
CUX1-215ENST00000556210 INPP5EQ9NRR6 644 aa13.51□□□□□ -0.25
CUX1-215ENST00000556210 SDHAF2Q9NX18 166 aa13.51□□□□□ -0.25
CUX1-215ENST00000556210 ABRACLQ9P1F3 81 aa13.51□□□□□ -0.25
CUX1-215ENST00000556210 P2RY10O00398 339 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 WNT1P04628 370 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 NFYAP23511 347 aaPredicted RBP13.5□□□□□ -0.25
CUX1-215ENST00000556210 NPSR1Q6W5P4 371 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 TMEM234Q8WY98 164 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 SERINC1Q9NRX5 453 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 A0A1W2PNR3 127 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 TLCD2A6NGC4 264 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 ZNF28P17035 718 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 OR3A2P47893 321 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 POU3F4P49335 361 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 SNU13P55769 128 aaKnown RBP13.5□□□□□ -0.25
CUX1-215ENST00000556210 HSD11B2P80365 405 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 NKAPLQ5M9Q1 402 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 BAIAP2L2Q6UXY1 529 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 FBXL2Q9UKC9 423 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 LGALS8O00214 317 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 PRAF2O60831 178 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 NSA2O95478 260 aaKnown RBP13.5□□□□□ -0.25
CUX1-215ENST00000556210 IL32P24001 234 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 HACD4Q5VWC8 232 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 OR2I1PQ8NGU4 316 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 ST8SIA4Q92187 359 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 ARPC5LQ9BPX5 153 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 C7orf50Q9BRJ6 194 aaKnown RBP13.5□□□□□ -0.25
CUX1-215ENST00000556210 NUDT9Q9BW91 350 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 ZNF471Q9BX82 626 aaPredicted RBP13.5□□□□□ -0.25
CUX1-215ENST00000556210 SLCO1C1Q9NYB5 712 aa13.5□□□□□ -0.25
CUX1-215ENST00000556210 PLXND1Q9Y4D7 1925 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 A0A087WV48 116 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 MPIG6BO95866 241 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 RAD52P43351 418 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 ARHGDIBP52566 201 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 HSD17B7P56937 341 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 FMODQ06828 376 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 HEPHL1Q6MZM0 1159 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 COX15Q7KZN9 410 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 OR51A4Q8NGJ6 313 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 ADAMTS18Q8TE60 1221 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 TAAR8Q969N4 342 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 AIFM2Q9BRQ8 373 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 OR2S2Q9NQN1 319 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 A0A087WUJ7 227 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 hCG_1807616A0A1W2PRN6 198 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 OR14I1A6ND48 311 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 METTL21EPA6NDL7 271 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 BCAT2O15382 392 aaPredicted RBP13.49□□□□□ -0.25
CUX1-215ENST00000556210 RAB3DO95716 219 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 ADRB1P08588 477 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 IFNGR1P15260 489 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 CDONQ4KMG0 1287 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 FAM69AQ5T7M9 428 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 MAMSTRQ6ZN01 415 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 RBM24Q9BX46 236 aaKnown RBP13.49□□□□□ -0.25
CUX1-215ENST00000556210 CAMK2AQ9UQM7 478 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 IFITM5A6NNB3 132 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 DCTN6O00399 190 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 FOLR1P15328 257 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 RPL35P42766 123 aaKnown RBP13.49□□□□□ -0.25
CUX1-215ENST00000556210 AGFG1P52594 562 aaKnown RBP13.49□□□□□ -0.25
CUX1-215ENST00000556210 ZNF584Q8IVC4 421 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 CCDC36Q8IYA8 594 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 BATF2Q8N1L9 274 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 NEK7Q8TDX7 302 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 NBASA2RRP1 2371 aa13.49□□□□□ -0.25
CUX1-215ENST00000556210 KANTRA0A1W2PQU2 76 aa13.48□□□□□ -0.25
CUX1-215ENST00000556210 ZNF878C9JN71 531 aa13.48□□□□□ -0.25
CUX1-215ENST00000556210 H7C2Y5 167 aa13.48□□□□□ -0.25
CUX1-215ENST00000556210 SYT7O43581 403 aa13.48□□□□□ -0.25
CUX1-215ENST00000556210 IGHV4-34P06331 123 aa13.48□□□□□ -0.25
CUX1-215ENST00000556210 CT45A8P0DMV1 189 aa13.48□□□□□ -0.25
CUX1-215ENST00000556210 CT45A9P0DMV2 189 aa13.48□□□□□ -0.25
CUX1-215ENST00000556210 TDGQ13569 410 aa13.48□□□□□ -0.25
CUX1-215ENST00000556210 TMEM176BQ3YBM2 270 aaPredicted RBP13.48□□□□□ -0.25
CUX1-215ENST00000556210 CT45A2Q5DJT8 189 aa13.48□□□□□ -0.25
CUX1-215ENST00000556210 LAMTOR1Q6IAA8 161 aa13.48□□□□□ -0.25
CUX1-215ENST00000556210 PAPD4Q6PIY7 484 aaKnown RBP13.48□□□□□ -0.25
CUX1-215ENST00000556210 ABHD12BQ7Z5M8 362 aaPredicted RBP13.48□□□□□ -0.25
CUX1-215ENST00000556210 GPBAR1Q8TDU6 330 aa13.48□□□□□ -0.25
CUX1-215ENST00000556210 MFFQ9GZY8 342 aa13.48□□□□□ -0.25
CUX1-215ENST00000556210 RARRES3Q9UL19 164 aa13.48□□□□□ -0.25
CUX1-215ENST00000556210 NPFFR2Q9Y5X5 522 aa13.48□□□□□ -0.25
CUX1-215ENST00000556210 GMDSO60547 372 aa13.48□□□□□ -0.25
CUX1-215ENST00000556210 SLC22A6Q4U2R8 563 aa13.48□□□□□ -0.25
CUX1-215ENST00000556210 DNM1P34Q6PK57 102 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms