RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 COMTD1Q86VU5 262 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 HOMEZQ8IX15 550 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 LRRC18Q8N456 261 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 C10orf53Q8N6V4 93 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 CPEB3Q8NE35 698 aaKnown RBP7.04□□□□□ -1.28
NEK9-206ENST00000555537 OR10S1Q8NGN2 331 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 IPCEF1Q8WWN9 437 aaPredicted RBP7.04□□□□□ -1.28
NEK9-206ENST00000555537 SLC38A4Q969I6 547 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 TMEM54Q969K7 222 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 ZDHHC16Q969W1 377 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 SLC41A3Q96GZ6 507 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 TMEM19Q96HH6 336 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 ATP6V1G3Q96LB4 118 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 OR52E6Q96RD3 313 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 DIRC2Q96SL1 478 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 CHIAQ9BZP6 476 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 BCL2L14Q9BZR8 327 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 MSL2Q9HCI7 577 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 TCF7L2Q9NQB0 619 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 TMEM38BQ9NVV0 291 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 GLTPQ9NZD2 209 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 P2RX2Q9UBL9 471 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 RPS6KB2Q9UBS0 482 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 FBXL3Q9UKT7 428 aa7.04□□□□□ -1.28
NEK9-206ENST00000555537 POLR3KQ9Y2Y1 108 aaPredicted RBP7.04□□□□□ -1.28
NEK9-206ENST00000555537 RYR3Q15413 4870 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 TRAV40A0A0B4J280 105 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 A0A1B0GUS0 222 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 TLDC2A0PJX2 215 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 SLC22A31A6NKX4 558 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 SRRM5B3KS81 715 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 PLPP3O14495 311 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 MFN2O95140 757 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 ZNF205O95201 554 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 PLATP00750 562 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 NUDT7P0C024 238 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 MYZAPP0CAP1 466 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 WNT5AP41221 380 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 ANXA11P50995 505 aaKnown RBP7.03□□□□□ -1.28
NEK9-206ENST00000555537 MNAT1P51948 309 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 CRISP3P54108 245 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 GYS2P54840 703 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 SLC3A1Q07837 685 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 PUDPQ08623 228 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 HLXQ14774 488 aaPredicted RBP7.03□□□□□ -1.28
NEK9-206ENST00000555537 ZMYND11Q15326 602 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 ZNF718Q3SXZ3 478 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 GTDC1Q4AE62 458 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 ALG10BQ5I7T1 473 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 ZNF362Q5T0B9 420 aaPredicted RBP7.03□□□□□ -1.28
NEK9-206ENST00000555537 TMEM53Q6P2H8 277 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 C6orf89Q6UWU4 347 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 C9orf139Q6ZV77 190 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 LRRC28Q86X40 367 aaPredicted RBP7.03□□□□□ -1.28
NEK9-206ENST00000555537 SNX32Q86XE0 403 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 ZNF101Q8IZC7 436 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 KLHL36Q8N4N3 616 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 TRIML2Q8N7C3 387 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 POU5F2Q8N7G0 328 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 ZNF781Q8N8C0 355 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 OR4K5Q8NGD3 323 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 OR1J2Q8NGS2 313 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 SLC25A40Q8TBP6 338 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 TCP10LQ8TDR4 215 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 UBLCP1Q8WVY7 318 aaPredicted RBP7.03□□□□□ -1.28
NEK9-206ENST00000555537 MARS2Q96GW9 593 aaKnown RBP7.03□□□□□ -1.28
NEK9-206ENST00000555537 APOPT1Q96IL0 206 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 ASPNQ9BXN1 380 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 OR2J1Q9GZK6 312 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 EGLN1Q9GZT9 426 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 TMEM106BQ9NUM4 274 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 KLHL21Q9UJP4 597 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 RNF114Q9Y508 228 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 NOTCH1P46531 2555 aa7.03□□□□□ -1.28
NEK9-206ENST00000555537 A0A0G2JPF8 293 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 IQCMA0A1B0GVH7 501 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 PLSCR5A0PG75 271 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 WDR91A4D1P6 747 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 HNRNPCL2B2RXH8 293 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 HNRNPCL3B7ZW38 293 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 F5H0A9 414 aaPredicted RBP7.02□□□□□ -1.29
NEK9-206ENST00000555537 RFXANKO14593 260 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 DHHO43323 396 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 TPST1O60507 370 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 HNRNPCL1O60812 293 aaKnown RBP7.02□□□□□ -1.29
NEK9-206ENST00000555537 FARS2O95363 451 aaKnown RBP7.02□□□□□ -1.29
NEK9-206ENST00000555537 KRT75O95678 551 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 SNAP29O95721 258 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 BPGMP07738 259 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 QDPRP09417 244 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 WNT2P09544 360 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 ALDOCP09972 364 aaKnown RBP7.02□□□□□ -1.29
NEK9-206ENST00000555537 HNRNPCL4P0DMR1 293 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 ADORA3P0DMS8 318 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 VSIG8P0DPA2 414 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 THRBP10828 461 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 APLNRP35414 380 aa7.02□□□□□ -1.29
NEK9-206ENST00000555537 MDH1P40925 334 aaKnown RBP7.02□□□□□ -1.29
NEK9-206ENST00000555537 CLNS1AP54105 237 aaKnown RBP7.02□□□□□ -1.29
NEK9-206ENST00000555537 DSTNP60981 165 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms