RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 LINC01555Q8NAE3 123 aa2.98□□□□□ -1.93
KTN1-222ENST00000555506 OR10R2Q8NGX6 335 aa2.98□□□□□ -1.93
KTN1-222ENST00000555506 OR6X1Q8NH79 312 aa2.98□□□□□ -1.93
KTN1-222ENST00000555506 ZNF502Q8TBZ5 544 aa2.98□□□□□ -1.93
KTN1-222ENST00000555506 RDH5Q92781 318 aa2.98□□□□□ -1.93
KTN1-222ENST00000555506 GSDMAQ96QA5 445 aa2.98□□□□□ -1.93
KTN1-222ENST00000555506 OR2M2Q96R28 347 aa2.98□□□□□ -1.93
KTN1-222ENST00000555506 TMEM165Q9HC07 324 aa2.98□□□□□ -1.93
KTN1-222ENST00000555506 CRLF2Q9HC73 371 aa2.98□□□□□ -1.93
KTN1-222ENST00000555506 CTPS2Q9NRF8 586 aa2.98□□□□□ -1.93
KTN1-222ENST00000555506 SAMSN1Q9NSI8 373 aaKnown RBP2.98□□□□□ -1.93
KTN1-222ENST00000555506 C20orf96Q9NUD7 363 aaPredicted RBP2.98□□□□□ -1.93
KTN1-222ENST00000555506 SLC25A37Q9NYZ2 338 aa2.98□□□□□ -1.93
KTN1-222ENST00000555506 PTTG3PQ9NZH4 202 aa2.98□□□□□ -1.93
KTN1-222ENST00000555506 PSME2Q9UL46 239 aa2.98□□□□□ -1.93
KTN1-222ENST00000555506 GOLT1BQ9Y3E0 138 aa2.98□□□□□ -1.93
KTN1-222ENST00000555506 PDS5BQ9NTI5 1447 aa2.98□□□□□ -1.93
KTN1-222ENST00000555506 F6UB75 175 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 CASC3O15234 703 aaKnown RBP2.97□□□□□ -1.93
KTN1-222ENST00000555506 ZNF861PO60384 105 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 HUS1O60921 280 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 SERPINA5P05154 406 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 CCNB1P14635 433 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 DCKP27707 260 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 MRPL19P49406 292 aaKnown RBP2.97□□□□□ -1.93
KTN1-222ENST00000555506 PAX5Q02548 391 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 UNC119Q13432 240 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 CLINT1Q14677 625 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 GUCA2BQ16661 112 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 KATNAL2Q8IYT4 538 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 PQLC3Q8N755 202 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 CCDC54Q8NEL0 328 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 OR5B3Q8NH48 314 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 GEMIN6Q8WXD5 167 aaKnown RBP2.97□□□□□ -1.93
KTN1-222ENST00000555506 C8orf44Q96CB5 159 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 DUS3LQ96G46 650 aaKnown RBP2.97□□□□□ -1.93
KTN1-222ENST00000555506 AURKBQ96GD4 344 aaPredicted RBP2.97□□□□□ -1.93
KTN1-222ENST00000555506 ZIM3Q96PE6 472 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 HRASLS2Q9NWW9 162 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 NUFIP1Q9UHK0 495 aaKnown RBP2.97□□□□□ -1.93
KTN1-222ENST00000555506 TBC1D24Q9ULP9 559 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 TRAPPC4Q9Y296 219 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 HEBP2Q9Y5Z4 205 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 CEMIPQ8WUJ3 1361 aa2.97□□□□□ -1.93
KTN1-222ENST00000555506 XKRYO14609 159 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 C6orf47O95873 294 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 STAG3L3P0CL85 134 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 ZNF17P17021 662 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 RCC1P18754 421 aaPredicted RBP2.96□□□□□ -1.93
KTN1-222ENST00000555506 CCNE1P24864 410 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 AK4P27144 223 aaPredicted RBP2.96□□□□□ -1.93
KTN1-222ENST00000555506 NAMPTP43490 491 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 CSNK1EP49674 416 aaKnown RBP2.96□□□□□ -1.93
KTN1-222ENST00000555506 NUTF2P61970 127 aaKnown RBP2.96□□□□□ -1.93
KTN1-222ENST00000555506 ZBED5Q49AG3 693 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 TWF2Q6IBS0 349 aaKnown RBP2.96□□□□□ -1.93
KTN1-222ENST00000555506 ZNF621Q6ZSS3 439 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 TMEM179Q6ZVK1 233 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 OTUD6AQ7L8S5 288 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 SH2D6Q7Z4S9 175 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 TMCO2Q7Z6W1 182 aaPredicted RBP2.96□□□□□ -1.93
KTN1-222ENST00000555506 CMTM1Q8IZ96 169 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 DTX3LQ8TDB6 740 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 CAPSLQ8WWF8 208 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 PEX13Q92968 403 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 ELSPBP1Q96BH3 223 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 LRRC58Q96CX6 371 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 PRRC1Q96M27 445 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 P2RX4Q99571 388 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 GABARAPL3Q9BY60 117 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 IQCGQ9H095 443 aaKnown RBP2.96□□□□□ -1.93
KTN1-222ENST00000555506 RPF2Q9H7B2 306 aaKnown RBP2.96□□□□□ -1.93
KTN1-222ENST00000555506 LGALS13Q9UHV8 139 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 TP53TG5Q9Y2B4 290 aa2.96□□□□□ -1.93
KTN1-222ENST00000555506 F11RQ9Y624 299 aaKnown RBP2.96□□□□□ -1.93
KTN1-222ENST00000555506 PHLPP2Q6ZVD8 1323 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 TRAV25A0A0B4J276 109 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 ZNF816-ZNF321PA0A0X1KG74 233 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 KBTBD11-OT1A0A1B0GTJ5 212 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 GOLGA6L7A0A1B0GV03 622 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 A8MU10 97 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 HIDE1A8MVS5 230 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 TRIM49D1C9J1S8 452 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 SMIM10L1P0DMW3 83 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 CALM1P0DP23 149 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 CALM2P0DP24 149 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 CALM3P0DP25 149 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 ZNF250P15622 560 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 GSTM3P21266 225 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 BCKDHBP21953 392 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 HMOX2P30519 316 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 CSNK1DP48730 415 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 SLC25A11Q02978 314 aaKnown RBP2.96□□□□□ -1.94
KTN1-222ENST00000555506 ILKQ13418 452 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 PSG5Q15238 335 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 SF3A2Q15428 464 aaKnown RBP2.96□□□□□ -1.94
KTN1-222ENST00000555506 XKR4Q5GH76 650 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 LINC00173Q6ZV60 143 aa2.96□□□□□ -1.94
KTN1-222ENST00000555506 CAMK2N1Q7Z7J9 78 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms