RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 ARHGEF9O43307 516 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 CXCL13O43927 109 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 TMCC2O75069 709 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 CNOT4O95628 575 aaKnown RBP4.46□□□□□ -1.7
VTI1B-202ENST00000553619 FADS2O95864 444 aaKnown RBP4.46□□□□□ -1.7
VTI1B-202ENST00000553619 IGHMP01871 453 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 OPN1LWP04000 364 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 LYNP07948 512 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 IGFBP1P08833 259 aaPredicted RBP4.46□□□□□ -1.7
VTI1B-202ENST00000553619 GNAO1P09471 354 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 FCGR2AP12318 317 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 GABRA1P14867 456 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 HIST1H1CP16403 213 aaKnown RBP4.46□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF708P17019 499 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 IL11P20809 199 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 DCKP27707 260 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 EPHA2P29317 976 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 PTGER4P35408 488 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 RFC3P40938 356 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 STARP49675 285 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 LHX2P50458 406 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 SLC25A1P53007 311 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 RPS7P62081 194 aaKnown RBP4.46□□□□□ -1.7
VTI1B-202ENST00000553619 ERVK-25P63136 954 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 TUBA4AP68366 448 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 H3F3AP84243 136 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 HSF1Q00613 529 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 SRYQ05066 204 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 RBPJQ06330 500 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.46□□□□□ -1.7
VTI1B-202ENST00000553619 RASGEF1BQ0VAM2 473 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 RAB40BQ12829 278 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 KLRB1Q12918 225 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 ACKR1Q16570 336 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 KCTD21Q4G0X4 260 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 FAM209AQ5JX71 171 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 THEM4Q5T1C6 240 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 C1QTNF12Q5T7M4 302 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 EEF1A1P5Q5VTE0 462 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 LEG1Q6P5S2 330 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 UGT2A3Q6UWM9 527 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 FCRLAQ7L513 359 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 P4HA3Q7Z4N8 544 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 GPAT4Q86UL3 456 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 MEX3DQ86XN8 651 aaKnown RBP4.46□□□□□ -1.7
VTI1B-202ENST00000553619 CPOQ8IVL8 374 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 STX19Q8N4C7 294 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 CISD2Q8N5K1 135 aaKnown RBP4.46□□□□□ -1.7
VTI1B-202ENST00000553619 TMEM99Q8N816 258 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 LRRC75AQ8NAA5 344 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 SLC37A3Q8NCC5 494 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 TSPAN14Q8NG11 270 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 OR52E2Q8NGJ4 325 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 OR8D4Q8NGM9 314 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 OR2T4Q8NH00 348 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 OR4Q3Q8NH05 313 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 OR4K13Q8NH42 304 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 OR6X1Q8NH79 312 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 OR10D3Q8NH80 312 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 MOSPD2Q8NHP6 518 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 ZPLD1Q8TCW7 415 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 C17orf50Q8WW18 174 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF524Q96C55 264 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 WBP1Q96G27 269 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 ADGRG7Q96K78 797 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 LRR1Q96L50 414 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 IL4I1Q96RQ9 567 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 MNTQ99583 582 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 TEAD3Q99594 435 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 TIMP4Q99727 224 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 NPAS1Q99742 590 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 KLHDC3Q9BQ90 382 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 ALG12Q9BV10 488 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 KATNB1Q9BVA0 655 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 MRPS26Q9BYN8 205 aaKnown RBP4.46□□□□□ -1.7
VTI1B-202ENST00000553619 PLA2G12AQ9BZM1 189 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 SLC25A18Q9H1K4 315 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 SLC6A15Q9H2J7 730 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 PRORYQ9H606 182 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 TMEM185BQ9H7F4 350 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF696Q9H7X3 374 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 RNF122Q9H9V4 155 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 B3GAT2Q9NPZ5 323 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 HAO2Q9NYQ3 351 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF226Q9NYT6 803 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 UBAP1Q9NZ09 502 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 EMC3Q9P0I2 261 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 KLHL9Q9P2J3 617 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 IL20RAQ9UHF4 553 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 ITGB1BP2Q9UKP3 347 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 CAMK2AQ9UQM7 478 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 TP53TG5Q9Y2B4 290 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 PCDHGB5Q9Y5G0 923 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 FKBP7Q9Y680 259 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 DNAJC13O75165 2243 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 GTF3C1Q12789 2109 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 NCKAP5O14513 1909 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 PKD1L2Q7Z442 2459 aa4.46□□□□□ -1.7
VTI1B-202ENST00000553619 VCANP13611 3396 aa4.45□□□□□ -1.7
VTI1B-202ENST00000553619 TEX13CA0A0J9YWL9 993 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms