RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 GOT2P00505 430 aaKnown RBP4.2□□□□□ -1.74
ATXN3-218ENST00000553309 IFNA10P01566 189 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 SHBGP04278 402 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 CRHP06850 196 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 CD3GP09693 182 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 FAM58BPP0C7Q3 252 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 IL12AP29459 219 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 FDFT1P37268 417 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 MAGEA4P43358 317 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 CDKN1BP46527 198 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 SLC1A6P48664 564 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 CAMLGP49069 296 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 SUOXP51687 545 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 LUMP51884 338 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-218ENST00000553309 CEBPGP53567 150 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 DAOAP59103 153 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 KIAA1024LP59773 190 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 MAGOHP61326 146 aaKnown RBP4.2□□□□□ -1.74
ATXN3-218ENST00000553309 PSPHP78330 225 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 ELP6Q0PNE2 266 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 PEX6Q13608 980 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 SNTB1Q13884 538 aaKnown RBP4.2□□□□□ -1.74
ATXN3-218ENST00000553309 IL11RAQ14626 422 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 ZNHIT3Q15649 155 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-218ENST00000553309 TOMM34Q15785 309 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-218ENST00000553309 TRMT5Q32P41 509 aaKnown RBP4.2□□□□□ -1.74
ATXN3-218ENST00000553309 CHRFAM7AQ494W8 412 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 HSD17B12Q53GQ0 312 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 CARD16Q5EG05 197 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 LIPJQ5W064 366 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 LRRC66Q68CR7 880 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 PAMR1Q6UXH9 720 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 CERS6Q6ZMG9 384 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 GDPD3Q7L5L3 318 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 SMIM15Q7Z3B0 74 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 P4HA3Q7Z4N8 544 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 ISCA2Q86U28 154 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 MYPOPQ86VE0 399 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-218ENST00000553309 TMEM126BQ8IUX1 230 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 CCDC71Q8IV32 467 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-218ENST00000553309 KLHL7Q8IXQ5 586 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 ZNF561Q8N587 486 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 LRRC17Q8N6Y2 441 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 CLEC1AQ8NC01 280 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 TMEM35BQ8NCS4 154 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 OR52M1Q8NGK5 317 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 BLOC1S5Q8TDH9 187 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 ELMO1Q92556 727 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 RAD54LQ92698 747 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 GTF2H4Q92759 462 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 MAGOHBQ96A72 148 aaKnown RBP4.2□□□□□ -1.74
ATXN3-218ENST00000553309 EXOSC8Q96B26 276 aaKnown RBP4.2□□□□□ -1.74
ATXN3-218ENST00000553309 PGM2Q96G03 612 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 ZNF514Q96K75 400 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-218ENST00000553309 MED18Q9BUE0 208 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 TEX12Q9BXU0 123 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 UCK2Q9BZX2 261 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 CCDC90BQ9GZT6 254 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 HSD3B7Q9H2F3 369 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 GAL3ST2Q9H3Q3 398 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 OPA3Q9H6K4 179 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 FOLH1BQ9HBA9 442 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 HHATLQ9HCP6 504 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 MID1IP1Q9NPA3 183 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 CTPS2Q9NRF8 586 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 ABCC13Q9NSE7 274 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 SDHAF2Q9NX18 166 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 NKIRAS1Q9NYS0 192 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 TREM2Q9NZC2 230 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 ZNF229Q9UJW7 825 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 LIPT1Q9Y234 373 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 SLC9A8Q9Y2E8 581 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 MEMO1Q9Y316 297 aa4.2□□□□□ -1.74
ATXN3-218ENST00000553309 MRPS2Q9Y399 296 aaKnown RBP4.2□□□□□ -1.74
ATXN3-218ENST00000553309 IGLV9-49A0A0B4J1Y8 123 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 A0A0D9SEW6 157 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 A0A0X1KG70 313 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 A0A1W2PPQ1 181 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 ERI2A8K979 691 aaKnown RBP4.19□□□□□ -1.74
ATXN3-218ENST00000553309 HACD1B0YJ81 288 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 CCDC188H7C350 402 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 PSMA7O14818 248 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 PHYHO14832 338 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 CALUO43852 315 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-218ENST00000553309 GMFGO60234 142 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 SPAG7O75391 227 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 MED6O75586 246 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 SLC22A5O76082 557 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 LGI1O95970 557 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 AGTP01019 485 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 RAF1P04049 648 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 RHOCP08134 193 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 HCKP08631 526 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 ANKRD34CP0C6C1 535 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 RNH1P13489 461 aaKnown RBP4.19□□□□□ -1.74
ATXN3-218ENST00000553309 FOLR1P15328 257 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 SPI1P17947 270 aa4.19□□□□□ -1.74
ATXN3-218ENST00000553309 XRCC1P18887 633 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-218ENST00000553309 OGNP20774 298 aaKnown RBP4.19□□□□□ -1.74
ATXN3-218ENST00000553309 NT5EP21589 574 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms