RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 LEG1Q6P5S2 330 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 SLC2A7Q6PXP3 512 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 MSANTD1Q6ZTZ1 278 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 SLC16A14Q7RTX9 510 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 TREML1Q86YW5 311 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 ZNF101Q8IZC7 436 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 RBM15BQ8NDT2 890 aaKnown RBP7.68□□□□□ -1.18
SYNE2-209ENST00000553308 OR1J2Q8NGS2 313 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 IPCEF1Q8WWN9 437 aaPredicted RBP7.68□□□□□ -1.18
SYNE2-209ENST00000553308 GEMIN6Q8WXD5 167 aaKnown RBP7.68□□□□□ -1.18
SYNE2-209ENST00000553308 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.68□□□□□ -1.18
SYNE2-209ENST00000553308 ZNF566Q969W8 418 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 TRIM44Q96DX7 344 aaPredicted RBP7.68□□□□□ -1.18
SYNE2-209ENST00000553308 TMEM43Q9BTV4 400 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 PAIP1Q9H074 479 aaKnown RBP7.68□□□□□ -1.18
SYNE2-209ENST00000553308 C1orf198Q9H425 327 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 TMEM27Q9HBJ8 222 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 PLEK2Q9NYT0 353 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 SOX21Q9Y651 276 aaPredicted RBP7.68□□□□□ -1.18
SYNE2-209ENST00000553308 AUP1Q9Y679 476 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 PPIAL4EA0A075B759 164 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 IGHV3OR16-10A0A075B7F0 116 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 PPIAL4CA0A0B4J2A2 164 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 IQCMA0A1B0GVH7 501 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 POM121CA8CG34 1229 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 PPIAL4DF5H284 164 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 TRAPPC2LH3BP13 241 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 HDAC3O15379 428 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 ENTPD5O75356 428 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 MT-ATP6P00846 226 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 IGHV2-70P01814 119 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 IGHMP01871 453 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 MMP7P09237 267 aaPredicted RBP7.67□□□□□ -1.18
SYNE2-209ENST00000553308 QDPRP09417 244 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 PPIAL4FP0DN26 164 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 KITP10721 976 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 ZNF12P17014 697 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 CCNOP22674 350 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 OMGP23515 440 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 APLNRP35414 380 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 WNT5AP41221 380 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 POLR2JP52435 117 aaKnown RBP7.67□□□□□ -1.18
SYNE2-209ENST00000553308 VSNL1P62760 191 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 PLP2Q04941 152 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 SRSF4Q08170 494 aaKnown RBP7.67□□□□□ -1.18
SYNE2-209ENST00000553308 SLC9A3R2Q15599 337 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 MOGQ16653 247 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 CEP85LQ5SZL2 805 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 THEM4Q5T1C6 240 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 GCNT6Q5T4J0 391 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 DPPA2Q7Z7J5 298 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 JAZF1Q86VZ6 243 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 MSRB3Q8IXL7 192 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 LRRC18Q8N456 261 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 CPEB3Q8NE35 698 aaKnown RBP7.67□□□□□ -1.18
SYNE2-209ENST00000553308 BHLHE22Q8NFJ8 381 aaPredicted RBP7.67□□□□□ -1.18
SYNE2-209ENST00000553308 GTF2H4Q92759 462 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 SLC25A28Q96A46 364 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 SLC25A44Q96H78 314 aaPredicted RBP7.67□□□□□ -1.18
SYNE2-209ENST00000553308 ZNF347Q96SE7 839 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 GPA33Q99795 319 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 SLITRK2Q9H156 845 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 LRMDAQ9H2I8 198 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 RAD21L1Q9H4I0 556 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 NPHS2Q9NP85 383 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 SDR39U1Q9NRG7 319 aaPredicted RBP7.67□□□□□ -1.18
SYNE2-209ENST00000553308 TAS2R5Q9NYW4 299 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 SLC25A37Q9NYZ2 338 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 ZIM2Q9NZV7 527 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 TRIM33Q9UPN9 1127 aa7.67□□□□□ -1.18
SYNE2-209ENST00000553308 MDFIC2A0A1B0GVS7 189 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 PLSCR5A0PG75 271 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 TRPC5OSA6NMA1 111 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 CLDN34H7C241 214 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 M0R3H8 397 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 RNF13O43567 381 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 OR6A2O95222 327 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 GPANK1O95872 356 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 CH25HO95992 272 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 PTHP01270 115 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 SBK2P0C263 348 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 AQP1P29972 269 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 GCH1P30793 250 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 CDK6Q00534 326 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 HSF2Q03933 536 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 SLC3A1Q07837 685 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 ZNF74Q16587 644 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 ZNF718Q3SXZ3 478 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 KRT71Q3SY84 523 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 PABPC1L2AQ5JQF8 200 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 SWT1Q5T5J6 900 aaKnown RBP7.66□□□□□ -1.18
SYNE2-209ENST00000553308 REEP3Q6NUK4 255 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 RFPL4BQ6ZWI9 263 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 SPATC1Q76KD6 591 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 MAVSQ7Z434 540 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 RANBP3LQ86VV4 465 aaPredicted RBP7.66□□□□□ -1.18
SYNE2-209ENST00000553308 KRT73Q86Y46 540 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 SYT14Q8NB59 555 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 SLC25A40Q8TBP6 338 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 MCHR2Q969V1 340 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms