RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 XRCC4Q13426 336 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 RCAN2Q14206 197 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 NCF4Q15080 339 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 CCL14Q16627 93 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 RFWD3Q6PCD5 774 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 SPESP1Q6UW49 350 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 Q6ZSR3 168 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 TMUB2Q71RG4 321 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 GDPD3Q7L5L3 318 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 HDDC2Q7Z4H3 204 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 SNX20Q7Z614 316 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 LRRTM1Q86UE6 522 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 RBM45Q8IUH3 476 aaKnown RBP3.39□□□□□ -1.87
SCAF11-210ENST00000547654 APRG1Q8IVJ8 170 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 ZNF100Q8IYN0 542 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 MYOCDQ8IZQ8 938 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 FAM9CQ8IZT9 166 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 SLC39A11Q8N1S5 342 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 OR2G2Q8NGZ5 317 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 OR52E5Q8NH55 327 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 CLHC1Q8NHS4 586 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 LYPD6BQ8NI32 183 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 SSC4DQ8WTU2 575 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 NPRL2Q8WTW4 380 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 PDCD6IPQ8WUM4 868 aaKnown RBP3.39□□□□□ -1.87
SCAF11-210ENST00000547654 OXGR1Q96P68 337 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 SORT1Q99523 831 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 MRPL45Q9BRJ2 306 aaKnown RBP3.39□□□□□ -1.87
SCAF11-210ENST00000547654 SYT11Q9BT88 431 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 ACTR3CQ9C0K3 210 aaPredicted RBP3.39□□□□□ -1.87
SCAF11-210ENST00000547654 FGF22Q9HCT0 170 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 FGF20Q9NP95 211 aaPredicted RBP3.39□□□□□ -1.87
SCAF11-210ENST00000547654 B3GNT2Q9NY97 397 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 SPRR3Q9UBC9 169 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 ABCD2Q9UBJ2 740 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 FYCO1Q9BQS8 1478 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 KIF1AQ12756 1690 aa3.39□□□□□ -1.87
SCAF11-210ENST00000547654 BRCA2P51587 3418 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 A0A1B0GWB2 263 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 EFCAB7A8K855 629 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 CCL21O00585 134 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 ETHE1O95571 254 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 DUS4LO95620 317 aaKnown RBP3.38□□□□□ -1.87
SCAF11-210ENST00000547654 POP4O95707 220 aaKnown RBP3.38□□□□□ -1.87
SCAF11-210ENST00000547654 FGGP02679 453 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 FGF1P05230 155 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 TPM3P06753 285 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 KLK3P07288 261 aaPredicted RBP3.38□□□□□ -1.87
SCAF11-210ENST00000547654 RBMY1CP0DJD4 496 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 CCL2P13500 99 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 MGMTP16455 207 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 ZNF26P17031 533 aaPredicted RBP3.38□□□□□ -1.87
SCAF11-210ENST00000547654 HMGCLP35914 325 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 SLC26A3P40879 764 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 PTGDSP41222 190 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 RPS14P62263 151 aaKnown RBP3.38□□□□□ -1.87
SCAF11-210ENST00000547654 GNB1P62873 340 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 LTB4RQ15722 352 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 C17orf58Q2M2W7 97 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 PARP15Q460N3 678 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 ZFP69Q49AA0 526 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 CCDC122Q5T0U0 273 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 OR2G6Q5TZ20 316 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 ARCQ7LC44 396 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 CMC1Q7Z7K0 106 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 APOBEC3FQ8IUX4 373 aaKnown RBP3.38□□□□□ -1.87
SCAF11-210ENST00000547654 ZBED8Q8IZ13 594 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 CMTM1Q8IZ96 169 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 PDIK1LQ8N165 341 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 SLC22A18ASQ8N1D0 253 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 FTMTQ8N4E7 242 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 FAM86B1Q8N7N1 296 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 FBXL13Q8NEE6 735 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 OR1S2Q8NGQ3 325 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 OR5B3Q8NH48 314 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 CXorf40AQ8TE69 158 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 FGF11Q92914 225 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 APH1AQ96BI3 265 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 ZNF597Q96LX8 424 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 TRNT1Q96Q11 434 aaKnown RBP3.38□□□□□ -1.87
SCAF11-210ENST00000547654 F2RL3Q96RI0 385 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 SH3GL1Q99961 368 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 KCTD14Q9BQ13 255 aaPredicted RBP3.38□□□□□ -1.87
SCAF11-210ENST00000547654 ECSITQ9BQ95 431 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 CHCHD5Q9BSY4 110 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 CHIAQ9BZP6 476 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 ACTR6Q9GZN1 396 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 ELOVL4Q9GZR5 314 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 JPT2Q9H910 190 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 MRPL47Q9HD33 250 aaKnown RBP3.38□□□□□ -1.87
SCAF11-210ENST00000547654 HRASLS2Q9NWW9 162 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 IMPAD1Q9NX62 359 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 GIN1Q9NXP7 522 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 THAP10Q9P2Z0 257 aaPredicted RBP3.38□□□□□ -1.87
SCAF11-210ENST00000547654 SLC17A4Q9Y2C5 497 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 CDC42BPGQ6DT37 1551 aa3.38□□□□□ -1.87
SCAF11-210ENST00000547654 RRBP1Q9P2E9 1410 aaKnown RBP3.37□□□□□ -1.87
SCAF11-210ENST00000547654 SBF1O95248 1867 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 PRUNE2Q8WUY3 3088 aa3.37□□□□□ -1.87
SCAF11-210ENST00000547654 TRPM3Q9HCF6 1732 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms