RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 CT45A2Q5DJT8 189 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 MESTQ5EB52 335 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 TANGO2Q6ICL3 276 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 UQCC3Q6UW78 93 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 ZNF546Q86UE3 836 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 SHISA5Q8N114 240 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 BEST3Q8N1M1 668 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 C12orf76Q8N812 135 aaPredicted RBP7.93□□□□□ -1.14
TDP1-204ENST00000545686 OR10K1Q8NGX5 313 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 DUSP19Q8WTR2 217 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 TSEN15Q8WW01 171 aaKnown RBP7.93□□□□□ -1.14
TDP1-204ENST00000545686 ASB17Q8WXJ9 295 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 SPACA7Q96KW9 195 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 TSSK2Q96PF2 358 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 CCDC3Q9BQI4 270 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 PBX4Q9BYU1 374 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 LRIT1Q9P2V4 623 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 MRPS33Q9Y291 106 aaKnown RBP7.93□□□□□ -1.14
TDP1-204ENST00000545686 DTX4Q9Y2E6 619 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 TMEM200CA6NKL6 621 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 DOK2O60496 412 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 AKR7A3O95154 331 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 RAB3DO95716 219 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 APOC3P02656 99 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 CD37P11049 281 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 RNH1P13489 461 aaKnown RBP7.92□□□□□ -1.14
TDP1-204ENST00000545686 PVRP15151 417 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 FSTP19883 344 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 TNFRSF4P43489 277 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 GPR3P46089 330 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 CENPAP49450 140 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 RPL18Q07020 188 aaKnown RBP7.92□□□□□ -1.14
TDP1-204ENST00000545686 C2orf76Q3KRA6 126 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 WDR38Q5JTN6 314 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 FNDC7Q5VTL7 733 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 GLT8D1Q68CQ7 371 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 TAF8Q7Z7C8 310 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 YAF2Q8IY57 180 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 ARHGEF39Q8N4T4 335 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 C10orf53Q8N6V4 93 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 STEAP2Q8NFT2 490 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 OR51A4Q8NGJ6 313 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 OR10AC1Q8NH08 325 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 CCL4L1Q8NHW4 92 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 OTOSQ8NHW6 89 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 MOGAT1Q96PD6 335 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 TSPAN32Q96QS1 320 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 OR8B4Q96RC9 309 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 LPAR4Q99677 370 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 EDEM2Q9BV94 578 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 SFXN1Q9H9B4 322 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 EPHA6Q9UF33 1036 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 TNFSF18Q9UNG2 199 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 PRELID3BQ9Y3B1 194 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 OR10H1Q9Y4A9 318 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 TRBV23OR9-2A0A075B6M9 112 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 TVP23AA6NH52 213 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 C4orf47A7E2U8 309 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 DCTN6O00399 190 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 KDM4BO94953 1096 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 CD74P04233 296 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 CNR1P21554 472 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 MST1P26927 711 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 KIR2DL1P43626 348 aaPredicted RBP7.92□□□□□ -1.14
TDP1-204ENST00000545686 FUT7Q11130 342 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 SKP2Q13309 424 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 ZMYND11Q15326 602 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 CCDC157Q569K6 752 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 VWA2Q5GFL6 755 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 YOD1Q5VVQ6 348 aaPredicted RBP7.92□□□□□ -1.14
TDP1-204ENST00000545686 JMJD6Q6NYC1 403 aaPredicted RBP7.92□□□□□ -1.14
TDP1-204ENST00000545686 DPY19L4Q7Z388 723 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 RD3Q7Z3Z2 195 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.92□□□□□ -1.14
TDP1-204ENST00000545686 BIVMQ86UB2 503 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 PM20D2Q8IYS1 436 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 OR4C3Q8NH37 302 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 HERVK_113Q902F9 699 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 PMEPA1Q969W9 287 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 TSACCQ96A04 125 aaPredicted RBP7.92□□□□□ -1.14
TDP1-204ENST00000545686 SEH1LQ96EE3 360 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 LRRC46Q96FV0 321 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 DGAT2Q96PD7 388 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 ATG5Q9H1Y0 275 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 PIGMQ9H3S5 423 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 SRA1Q9HD15 236 aaKnown RBP7.92□□□□□ -1.14
TDP1-204ENST00000545686 ZNF346Q9UL40 294 aaKnown RBP7.92□□□□□ -1.14
TDP1-204ENST00000545686 KLF2Q9Y5W3 355 aaPredicted RBP7.92□□□□□ -1.14
TDP1-204ENST00000545686 CHD7Q9P2D1 2997 aa7.92□□□□□ -1.14
TDP1-204ENST00000545686 A0A1B0GTH9 108 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 LINC01553A4QN01 128 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 OR5H14A6NHG9 310 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 TEX46H3BTG2 121 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 TGFBR3LH3BV60 316 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 HLA-GP17693 338 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 MPZP25189 248 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 STARP49675 285 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 CAPZA1P52907 286 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 MELKQ14680 651 aa7.91□□□□□ -1.14
TDP1-204ENST00000545686 GRM7Q14831 915 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms