RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 DENND2DQ9H6A0 471 aaPredicted RBP7.26□□□□□ -1.25
USP28-215ENST00000545608 GLTPQ9NZD2 209 aa7.26□□□□□ -1.25
USP28-215ENST00000545608 DUSP13Q9UII6 198 aa7.26□□□□□ -1.25
USP28-215ENST00000545608 LEF1Q9UJU2 399 aaPredicted RBP7.26□□□□□ -1.25
USP28-215ENST00000545608 B2RBV5 119 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 FAM157AC9JC47 383 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 KPNA4O00629 521 aaPredicted RBP7.25□□□□□ -1.25
USP28-215ENST00000545608 DHHO43323 396 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 RNF13O43567 381 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 NCR1O76036 304 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 CLPTM1O96005 669 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 C8BP07358 591 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 OR8G3PP0DMU2 310 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 NAT2P11245 290 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 CCL2P13500 99 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 ITGA2P17301 1181 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 CD247P20963 164 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 GPR6P46095 362 aaPredicted RBP7.25□□□□□ -1.25
USP28-215ENST00000545608 DVL1P1P54792 670 aaPredicted RBP7.25□□□□□ -1.25
USP28-215ENST00000545608 GALK2Q01415 458 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 CYP51A1Q16850 503 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 ALKBH6Q3KRA9 238 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 TTMPQ5BVD1 217 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 ZBTB37Q5TC79 503 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 TTC33Q6PID6 262 aaPredicted RBP7.25□□□□□ -1.25
USP28-215ENST00000545608 DHDDSQ86SQ9 333 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 SLC22A24Q8N4F4 322 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 PAQR4Q8N4S7 273 aaPredicted RBP7.25□□□□□ -1.25
USP28-215ENST00000545608 RFLNBQ8N5W9 214 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 DPP10Q8N608 796 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 BCAS4Q8TDM0 211 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 ADAMTS16Q8TE57 1224 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 RDH5Q92781 318 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 ZNF566Q969W8 418 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 TAMM41Q96BW9 452 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 SLC25A44Q96H78 314 aaPredicted RBP7.25□□□□□ -1.25
USP28-215ENST00000545608 DHRS1Q96LJ7 313 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 TSPAN32Q96QS1 320 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 SH3GL3Q99963 347 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 PRSS27Q9BQR3 290 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 RACGAP1Q9H0H5 632 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 ZNF385DQ9H6B1 395 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 NARFLQ9H6Q4 476 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 KAT8Q9H7Z6 458 aaKnown RBP7.25□□□□□ -1.25
USP28-215ENST00000545608 MEPEQ9NQ76 525 aaPredicted RBP7.25□□□□□ -1.25
USP28-215ENST00000545608 NANSQ9NR45 359 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 TMEM38BQ9NVV0 291 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 TREM2Q9NZC2 230 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 SLC7A8Q9UHI5 535 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 SLC7A7Q9UM01 511 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 NDUFAF1Q9Y375 327 aa7.25□□□□□ -1.25
USP28-215ENST00000545608 A0A1W2PPW3 197 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 TRAPPC13A5PLN9 417 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 MEGF11A6BM72 1044 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 B4DSR2 109 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 NDUFAB1O14561 156 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 TMPRSS2O15393 492 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 TCF21O43680 179 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 RP2O75695 350 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 BCL10O95999 233 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 QDPRP09417 244 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 ASAH2BP0C7U1 165 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 PGA4P0DJD7 388 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 PGA3P0DJD8 388 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 ACHEP22303 614 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 MAGEB1P43366 347 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 GZMMP51124 257 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 CRYBA2P53672 197 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 TMEM33P57088 247 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 ERVS71-1P61550 626 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 RPS23P62266 143 aaKnown RBP7.24□□□□□ -1.25
USP28-215ENST00000545608 MYBPC1Q00872 1141 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 RUNX1T1Q06455 604 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 NFYCQ13952 458 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 UGT2A3Q6UWM9 527 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 LYPD4Q6UWN0 246 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 RINLQ6ZS11 566 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 SLC30A7Q8NEW0 376 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 OR4K5Q8NGD3 323 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 OR10A6Q8NH74 314 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 MCHR2Q969V1 340 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 ATP6V1G3Q96LB4 118 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 ZNF347Q96SE7 839 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 ZNF426Q9BUY5 554 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 TMPRSS13Q9BYE2 586 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 OR51B6Q9H340 312 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 RABEP2Q9H5N1 569 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 RNF121Q9H920 327 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 LPAR2Q9HBW0 351 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 ZNF275Q9NSD4 429 aaPredicted RBP7.24□□□□□ -1.25
USP28-215ENST00000545608 TAAR3PQ9P1P4 343 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 PFDN2Q9UHV9 154 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 ZNF229Q9UJW7 825 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 FBXL3Q9UKT7 428 aa7.24□□□□□ -1.25
USP28-215ENST00000545608 IGLV3-9A0A075B6K5 115 aa7.23□□□□□ -1.25
USP28-215ENST00000545608 BLOC1S5-TXNDC5H3BN57 136 aa7.23□□□□□ -1.25
USP28-215ENST00000545608 ANGPT2O15123 496 aa7.23□□□□□ -1.25
USP28-215ENST00000545608 PPIHO43447 177 aaKnown RBP7.23□□□□□ -1.25
USP28-215ENST00000545608 CDC14BO60729 498 aa7.23□□□□□ -1.25
USP28-215ENST00000545608 VENTXO95231 258 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms