RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-219	ENST00000543660	RMND5A	Q9H871	391 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660		Q9N2J8	555 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ETAA1	Q9NY74	926 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	AHSP	Q9NZD4	102 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NUDT4	Q9NZJ9	180 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SLAMF8	Q9P0V8	285 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZDHHC2	Q9UIJ5	367 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ICAM5	Q9UMF0	924 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	AMDHD2	Q9Y303	409 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660		A0A0G2JMP0	313 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660		A0A0X1KG70	313 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ELOVL7	A1L3X0	281 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SH3PXD2B	A1X283	911 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TMEM247	A6NEH6	219 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	FAM90A8P	A6NJQ4	464 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNF716	A6NP11	495 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SUPT3H	B4E1H0	165 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CLDN34	H7C241	214 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660		J3QLI3	93 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	hCG_2039718	K7EN88	272 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	UPK1A	O00322	258 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	KLF11	O14901	512 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SCAMP2	O15127	329 aa	Known RBP	4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	OGG1	O15527	345 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SUPT3H	O75486	399 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	WBP4	O75554	376 aa	Known RBP	4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PIAS1	O75925	651 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	HIST1H2AB	P04908	130 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ADRA2A	P08913	450 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	FAM90A13P	P0C7W8	464 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	FAM90A24P	P0C7X0	464 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CALCB	P10092	127 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	OMG	P23515	440 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CALCR	P30988	508 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CXCR5	P32302	372 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GABRA3	P34903	492 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MAP3K8	P41279	467 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ELK3	P41970	407 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SLC1A3	P43003	542 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNF134	P52741	427 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	KRTAP10-3	P60369	221 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PRPS1	P60891	318 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MYBPC1	Q00872	1141 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	POU3F1	Q03052	451 aa	Predicted RBP	4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	HGFAC	Q04756	655 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PPP1R8	Q12972	351 aa	Known RBP	4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	BAMBI	Q13145	260 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PDK3	Q15120	406 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SLC9A3R2	Q15599	337 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CD226	Q15762	336 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TOMM34	Q15785	309 aa	Predicted RBP	4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	KRT71	Q3SY84	523 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GLE1	Q53GS7	698 aa	Known RBP	4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	C9orf135	Q5VTT2	229 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	FRG2	Q64ET8	278 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ACSM5	Q6NUN0	579 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ANKRD16	Q6P6B7	361 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RBMS3	Q6XE24	437 aa	Known RBP	4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	HIST3H2A	Q7L7L0	130 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GOLGA7	Q7Z5G4	137 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GPAT4	Q86UL3	456 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CDK20	Q8IZL9	346 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	FAM9C	Q8IZT9	166 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	OR2L13	Q8N349	312 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RIBC1	Q8N443	379 aa	Predicted RBP	4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	UXS1	Q8NBZ7	420 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SLC16A11	Q8NCK7	471 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	BEND2	Q8NDZ0	799 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ATP6V1C2	Q8NEY4	427 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	OR4M2	Q8NGB6	313 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	OR52L2P	Q8NGH6	319 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	B4GALNT2	Q8NHY0	566 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SLC25A28	Q96A46	364 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SPSB1	Q96BD6	273 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TMIGD2	Q96BF3	282 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	APH1A	Q96BI3	265 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NRBF2	Q96F24	287 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	BOD1	Q96IK1	185 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNF48	Q96MX3	618 aa	Predicted RBP	4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SLC38A2	Q96QD8	506 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	FRG2B	Q96QU4	278 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	BBS4	Q96RK4	519 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CDRT15	Q96T59	188 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GAL3ST1	Q99999	423 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	LMF2	Q9BU23	707 aa	Known RBP	4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	KATNB1	Q9BVA0	655 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	FAIM2	Q9BWQ8	316 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNF442	Q9H7R0	627 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	HHATL	Q9HCP6	504 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GPR160	Q9UJ42	338 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MRTO4	Q9UKD2	239 aa	Known RBP	4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CHMP2B	Q9UQN3	213 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NOSIP	Q9Y314	301 aa	Known RBP	4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TENM2	Q9NT68	2774 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DNAH9	Q9NYC9	4486 aa		4.13	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660		A0A1B0GUS0	222 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660		G3V4G9	280 aa		4.12	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ETV2	O00321	342 aa	Predicted RBP	4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms