RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 QDPRP09417 244 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 GATA3P23771 443 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 UCP2P55851 309 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 CCL8P80075 99 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 PLP2Q04941 152 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 MELKQ14680 651 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 NPTX1Q15818 432 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 HIST3H3Q16695 136 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 ALKBH6Q3KRA9 238 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 AGKQ53H12 422 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 FAM209AQ5JX71 171 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 DLEU7Q6UYE1 221 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 C1orf229Q6ZS94 237 aaPredicted RBP10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 HIST3H2AQ7L7L0 130 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 SLC16A14Q7RTX9 510 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 HDDC2Q7Z4H3 204 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 C1QL2Q7Z5L3 287 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 PEG10Q86TG7 708 aaKnown RBP10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 PTOV1Q86YD1 416 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 SLC30A8Q8IWU4 369 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 PAQR4Q8N4S7 273 aaPredicted RBP10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 GPR32P1Q8NGA4 272 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 OR4M2Q8NGB6 313 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 GCDHQ92947 438 aaPredicted RBP10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 HIST1H2ACQ93077 130 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 TSPAN32Q96QS1 320 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 SEPHS2Q99611 448 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 EBF4Q9BQW3 602 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 PCDHAC1Q9H158 963 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 RABEP2Q9H5N1 569 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 TMBIM4Q9HC24 238 aa10.24□□□□□ -0.77
CBX3P4-202ENST00000540428 CPSF4LA6NMK7 179 aaKnown RBP10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 CLDN25C9JDP6 229 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 PLPP2O43688 288 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 CDC14BO60729 498 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 MPZL1O95297 269 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 AVPP01185 164 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 IGHV3-13P01766 116 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 CCL2P13500 99 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 ZNF84P51523 738 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 ZNF133P52736 654 aaPredicted RBP10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 CLRN1P58418 232 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 ERVS71-1P61550 626 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 MVKQ03426 396 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 THSD4Q6ZMP0 1018 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 PATL1Q86TB9 770 aaKnown RBP10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 DPP10Q8N608 796 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 LRRC17Q8N6Y2 441 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 C3orf56Q8N813 242 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 RBM15BQ8NDT2 890 aaKnown RBP10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 NOXO1Q8NFA2 376 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 MCHR2Q969V1 340 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 TIMD4Q96H15 378 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 SUCNR1Q9BXA5 334 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 MRPL13Q9BYD1 178 aaKnown RBP10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 TMPRSS13Q9BYE2 586 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 DECR2Q9NUI1 292 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 STX18Q9P2W9 335 aaKnown RBP10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 LEF1Q9UJU2 399 aaPredicted RBP10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 SLC7A7Q9UM01 511 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 WIPI2Q9Y4P8 454 aa10.23□□□□□ -0.77
CBX3P4-202ENST00000540428 LOC105371242A0A075B767 164 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 A0A1W2PRG6 482 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 IGF2P01344 180 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 IGHV2-5P01817 119 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 OPN1SWP03999 348 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 MMP7P09237 267 aaPredicted RBP10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 UMPSP11172 480 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 DRD4P21917 467 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 APLNRP35414 380 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 CYP51A1Q16850 503 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 HFEQ30201 348 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 C10orf128Q5T292 105 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 AVPI1Q5T686 147 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 INTS11Q5TA45 600 aaKnown RBP10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 UNQ6126/PRO20091Q6UXV3 157 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 USP51Q70EK9 711 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 NANOGNBQ7Z5D8 188 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 DHDDSQ86SQ9 333 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 C1orf174Q8IYL3 243 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 OR4D11Q8NGI4 311 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 OR1J1Q8NGS3 322 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 NANPQ8TBE9 248 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 LRRC8CQ8TDW0 803 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 RASSF5Q8WWW0 418 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 STON2Q8WXE9 905 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 RAB1CQ92928 201 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 ELMOD3Q96FG2 381 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 ZNF347Q96SE7 839 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 KCNN2Q9H2S1 579 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 OR51B6Q9H340 312 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 SAP30LQ9HAJ7 183 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 SIAEQ9HAT2 523 aa10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 MEPEQ9NQ76 525 aaPredicted RBP10.22□□□□□ -0.77
CBX3P4-202ENST00000540428 NPIPB13A6NJU9 1138 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 NPIPB4C9JG80 1138 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 MCIDASD6RGH6 385 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 BLOC1S5-TXNDC5H3BN57 136 aa10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 KPNA4O00629 521 aaPredicted RBP10.21□□□□□ -0.77
CBX3P4-202ENST00000540428 TPD52L2O43399 206 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms