RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 SEC11CQ9BY50 192 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 PKIBQ9C010 78 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 UCK1Q9HA47 277 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 RAB9BQ9NP90 201 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 DNAJB11Q9UBS4 358 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 ELF5Q9UKW6 265 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-214ENST00000540109 SLCO1B1Q9Y6L6 691 aa5.58□□□□□ -1.52
PTPRD-214ENST00000540109 A0A1W2PPQ1 181 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 SYT5O00445 386 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 HNRNPA3P51991 378 aaKnown RBP5.57□□□□□ -1.52
PTPRD-214ENST00000540109 MLF1P58340 268 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 HERV-K104P61576 105 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 RPS13P62277 151 aaKnown RBP5.57□□□□□ -1.52
PTPRD-214ENST00000540109 C18orf21Q32NC0 220 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-214ENST00000540109 EXOSC6Q5RKV6 272 aaKnown RBP5.57□□□□□ -1.52
PTPRD-214ENST00000540109 KDM4DQ6B0I6 523 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 XAF1Q6GPH4 301 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 OR5M10Q6IEU7 315 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 HMGN2P46Q86SG4 172 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 GLRX5Q86SX6 157 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF439Q8NDP4 499 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 OR4M1Q8NGD0 313 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 FNDC9Q8TBE3 224 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 CYB5D2Q8WUJ1 264 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 ARRDC3Q96B67 414 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 AKR1E2Q96JD6 320 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 LRRC3BQ96PB8 259 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 FAM103A1Q9BTL3 118 aaKnown RBP5.57□□□□□ -1.52
PTPRD-214ENST00000540109 ALG8Q9BVK2 526 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 DPH1Q9BZG8 443 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 TBL1XR1Q9BZK7 514 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 AMBRA1Q9C0C7 1298 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 CD84Q9UIB8 345 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 MSRAQ9UJ68 235 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 TMED3Q9Y3Q3 217 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 MUC22E2RYF6 1773 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-214ENST00000540109 A0A0G2JN53 185 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 HEPACAM2A8MVW5 462 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 GTPBP1O00178 669 aaKnown RBP5.57□□□□□ -1.52
PTPRD-214ENST00000540109 GPR171O14626 319 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 DIRAS3O95661 229 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 HLA-AP01891 365 aaKnown RBP5.57□□□□□ -1.52
PTPRD-214ENST00000540109 CST2P09228 141 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 SLC35G4P0C7Q5 338 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 GAAP10253 952 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 S1PR1P21453 382 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 IRS1P35568 1242 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 TBPL1P62380 186 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 KCNJ10P78508 379 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 RUNX3Q13761 415 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 ITPRIPL2Q3MIP1 535 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 PABPC1L2AQ5JQF8 200 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 MANEAQ5SRI9 462 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 DMRTA1Q5VZB9 504 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 TMEM215Q68D42 235 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 FAHD2BQ6P2I3 314 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-214ENST00000540109 C9orf62Q8N4C0 152 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 TCTEX1D1Q8N7M0 179 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF610Q8N9Z0 462 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 PHOSPHO1Q8TCT1 267 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 SPRYD4Q8WW59 207 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-214ENST00000540109 SMIM12Q96EX1 92 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 FAHD2AQ96GK7 314 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 MBOAT4Q96T53 435 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 CNN2Q99439 309 aaKnown RBP5.57□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF426Q9BUY5 554 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 TMEM38AQ9H6F2 299 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 DMRT3Q9NQL9 472 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 CXXC1Q9P0U4 656 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-214ENST00000540109 EPHA6Q9UF33 1036 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 AQP7P3A6NL99 342 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF850A8MQ14 1090 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 E5RGE8 158 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 BCL2L11O43521 198 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 YIF1AO95070 293 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 CYB5R3P00387 301 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-214ENST00000540109 SFTA3P0C7M3 94 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 SNRPBP14678 240 aaKnown RBP5.57□□□□□ -1.52
PTPRD-214ENST00000540109 CCR8P51685 355 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 FAM78AQ5JUQ0 283 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 SAPCD1Q5SSQ6 148 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 PRSS45Q7RTY3 260 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 BAP18Q8IXM2 172 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF101Q8IZC7 436 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 OR13C3Q8NGS6 347 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 ATOH1Q92858 354 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-214ENST00000540109 ISOC2Q96AB3 205 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 MMP26Q9NRE1 261 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 MMP24Q9Y5R2 645 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 A0A1W2PPH5 198 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 TBC1D3BA6NDS4 549 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 OR6C76A6NM76 312 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF726A6NNF4 738 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF736B4DX44 427 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-214ENST00000540109 GABRPO00591 440 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 TRAF3IP2O43734 574 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-214ENST00000540109 GPX5O75715 221 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 RPA2P15927 270 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 GZMMP51124 257 aa5.57□□□□□ -1.52
PTPRD-214ENST00000540109 NAAAQ02083 359 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms