RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 LINGO2Q7L985 606 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 RRM2BQ7LG56 351 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 TSEN54Q7Z6J9 526 aaKnown RBP12.93□□□□□ -0.34
USB1-203ENST00000539737 NRMQ8IXM6 262 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 CDK20Q8IZL9 346 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 SLC7A6OSQ96CW6 309 aaPredicted RBP12.93□□□□□ -0.34
USB1-203ENST00000539737 CLPTM1LQ96KA5 538 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 DHRS1Q96LJ7 313 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 ZNF347Q96SE7 839 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 LINC00470Q9BZP3 86 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 MAGIXQ9H6Y5 334 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 IL1RAPQ9NPH3 570 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 FKBP7Q9Y680 259 aa12.93□□□□□ -0.34
USB1-203ENST00000539737 A0A096LPE4 126 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 A0A1W2PPZ6 126 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 TCRBV5S2A0A599 114 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 VSTM5A8MXK1 200 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 C11orf98E9PRG8 122 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 SPRY1O43609 319 aaPredicted RBP12.92□□□□□ -0.34
USB1-203ENST00000539737 TCF21O43680 179 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 IGFBP1P08833 259 aaPredicted RBP12.92□□□□□ -0.34
USB1-203ENST00000539737 OR4A8P0C604 315 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 SAGP10523 405 aaPredicted RBP12.92□□□□□ -0.34
USB1-203ENST00000539737 HOXB6P17509 224 aaKnown RBP12.92□□□□□ -0.34
USB1-203ENST00000539737 HNF1AP20823 631 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 SRP14P37108 136 aaKnown RBP12.92□□□□□ -0.34
USB1-203ENST00000539737 SNRPD2P62316 118 aaKnown RBP12.92□□□□□ -0.34
USB1-203ENST00000539737 SPIBQ01892 262 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 PRKCDQ05655 676 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 ADIPOQQ15848 244 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 ANKDD1AQ495B1 522 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 LIPNQ5VXI9 398 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 C12orf54Q6X4T0 127 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 HDDC2Q7Z4H3 204 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 MEX3DQ86XN8 651 aaKnown RBP12.92□□□□□ -0.34
USB1-203ENST00000539737 ZDHHC21Q8IVQ6 265 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 GPR137CQ8N3F9 429 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 LRRC17Q8N6Y2 441 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 SLC7A13Q8TCU3 470 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 ALKBH3Q96Q83 286 aaPredicted RBP12.92□□□□□ -0.34
USB1-203ENST00000539737 OR2M2Q96R28 347 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 NDEL1Q9GZM8 345 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 NARFLQ9H6Q4 476 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 LPAR2Q9HBW0 351 aa12.92□□□□□ -0.34
USB1-203ENST00000539737 A0A087WUU8 490 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 A0A1W2PRG6 482 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 SH3PXD2BA1X283 911 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 EFCAB9A8MZ26 197 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 BLOC1S5-TXNDC5H3BN57 136 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 LILRA1O75019 489 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 SERPINI2O75830 405 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 DIRAS1O95057 198 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 CRYAAP02489 173 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 HLA-DOBP13765 273 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 HOXB1P14653 301 aaPredicted RBP12.91□□□□□ -0.34
USB1-203ENST00000539737 APEX1P27695 318 aaKnown RBP12.91□□□□□ -0.34
USB1-203ENST00000539737 SERPINF1P36955 418 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 MAGEA2P43356 314 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 SLC9A3P48764 834 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 MS4A2Q01362 244 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 RPL18Q07020 188 aaKnown RBP12.91□□□□□ -0.34
USB1-203ENST00000539737 FAM98BQ52LJ0 330 aaKnown RBP12.91□□□□□ -0.34
USB1-203ENST00000539737 THSD4Q6ZMP0 1018 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 SLC35D2Q76EJ3 337 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 PIWIL3Q7Z3Z3 882 aaKnown RBP12.91□□□□□ -0.34
USB1-203ENST00000539737 TMEM123Q8N131 208 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 SVOPLQ8N434 492 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 OR1K1Q8NGR3 316 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 SEPHS2Q99611 448 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 OCEL1Q9H607 264 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 B3GAT2Q9NPZ5 323 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 CA10Q9NS85 328 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 MED29Q9NX70 200 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 TAS2R5Q9NYW4 299 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 HIF3AQ9Y2N7 669 aa12.91□□□□□ -0.34
USB1-203ENST00000539737 LOC390937A0A1W2PQ73 354 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 ZNF503-AS2A6NEH8 195 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 AQP12BA6NM10 295 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 ZNF726A6NNF4 738 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 ACOT8O14734 319 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 GADD45GO95257 159 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 TSPAN19P0C672 248 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 CECR9P0C854 216 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 IFNGR1P15260 489 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 FUT4P22083 530 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 DAP3P51398 398 aaKnown RBP12.9□□□□□ -0.34
USB1-203ENST00000539737 ROR2Q01974 943 aaKnown RBP12.9□□□□□ -0.34
USB1-203ENST00000539737 FLOT2Q14254 428 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 TBRG1Q3YBR2 411 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 ANKRD16Q6P6B7 361 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 PGM2L1Q6PCE3 622 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 AQP12AQ8IXF9 295 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 OR6X1Q8NH79 312 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 BOD1Q96IK1 185 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 LRR1Q96L50 414 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 SLC38A2Q96QD8 506 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 TPK1Q9H3S4 243 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 INIPQ9NRY2 104 aa12.9□□□□□ -0.34
USB1-203ENST00000539737 STX18Q9P2W9 335 aaKnown RBP12.9□□□□□ -0.34
USB1-203ENST00000539737 TMEFF2Q9UIK5 374 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms