RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 ITPR2Q14571 2701 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 LRRC3CA6NJW4 275 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 LYNX1G3V0Z9 82 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 MAGEB3O15480 346 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 DHHO43323 396 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 OR7A10O76100 309 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 LYNX1P0DP58 116 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 DBTP11182 482 aaKnown RBP6.43□□□□□ -1.38
MSH6-209ENST00000538136 NPR2P20594 1047 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 PRPH2P23942 346 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 PRB3Q04118 309 aaPredicted RBP6.43□□□□□ -1.38
MSH6-209ENST00000538136 HNRNPA0Q13151 305 aaKnown RBP6.43□□□□□ -1.38
MSH6-209ENST00000538136 GK3PQ14409 553 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 MAD2L1BPQ15013 274 aaPredicted RBP6.43□□□□□ -1.38
MSH6-209ENST00000538136 ARSJQ5FYB0 599 aaPredicted RBP6.43□□□□□ -1.38
MSH6-209ENST00000538136 OR2G6Q5TZ20 316 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 OR2T2Q6IF00 324 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 UGT2A3Q6UWM9 527 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 PIWIL3Q7Z3Z3 882 aaKnown RBP6.43□□□□□ -1.38
MSH6-209ENST00000538136 OR10AD1Q8NGE0 317 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 OR5T2Q8NGG2 359 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 ALG12Q9BV10 488 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 MEPEQ9NQ76 525 aaPredicted RBP6.43□□□□□ -1.38
MSH6-209ENST00000538136 A0A087WV48 116 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 TMEM269A0A1B0GVZ9 245 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 C3orf80F5H4A9 247 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 SSX4O60224 188 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 IGHV3-13P01766 116 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 IGHV3-7P01780 117 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 MAS1P04201 325 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 ZNF32P17041 273 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 CSRP3P50461 194 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 MVDP53602 400 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 PRPS1P60891 318 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 OR6V1Q8N148 313 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 GTPBP8Q8N3Z3 284 aaPredicted RBP6.43□□□□□ -1.38
MSH6-209ENST00000538136 SLC15A4Q8N697 577 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 ASCC1Q8N9N2 400 aaKnown RBP6.43□□□□□ -1.38
MSH6-209ENST00000538136 ZFP62Q8NB50 900 aaPredicted RBP6.43□□□□□ -1.38
MSH6-209ENST00000538136 ADAMTS17Q8TE56 1095 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 RORBQ92753 470 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 S100PBPQ96BU1 408 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 RNFT2Q96EX2 444 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 HDHD5Q9BXW7 423 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 CLEC4MQ9H2X3 399 aaPredicted RBP6.43□□□□□ -1.38
MSH6-209ENST00000538136 ELOVL3Q9HB03 270 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 ABCB9Q9NP78 766 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 ASIC5Q9NY37 505 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 CNOT11Q9UKZ1 510 aaKnown RBP6.43□□□□□ -1.38
MSH6-209ENST00000538136 CRYBG3Q68DQ2 2970 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 LOC110117498-PIK3R3F6TDL0 507 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 ENTPD6O75354 484 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 CTLA4P16410 223 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 GSTM3P21266 225 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 OPRM1P35372 400 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 PTGER4P35408 488 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 TLE4Q04727 773 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 LINC00303Q3SY05 128 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 NKAPLQ5M9Q1 402 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 ZNF544Q6NX49 715 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 MBOAT2Q6ZWT7 520 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 USP51Q70EK9 711 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 SETD9Q8NE22 299 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 NANOS1Q8WY41 292 aaKnown RBP6.43□□□□□ -1.38
MSH6-209ENST00000538136 OCEL1Q9H607 264 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 DECR2Q9NUI1 292 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 KCNG2Q9UJ96 466 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 CORINQ9Y5Q5 1042 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 ATG2AQ2TAZ0 1938 aa6.43□□□□□ -1.38
MSH6-209ENST00000538136 A0A1B0GVC2 190 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 SGCEO43556 437 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 SERPINA3P01011 423 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 CSN2P05814 226 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 C21orf33P30042 268 aaPredicted RBP6.42□□□□□ -1.38
MSH6-209ENST00000538136 PEX19P40855 299 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 MAP3K8P41279 467 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 ACAA2P42765 397 aaKnown RBP6.42□□□□□ -1.38
MSH6-209ENST00000538136 MAP2K4P45985 399 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.42□□□□□ -1.38
MSH6-209ENST00000538136 THEM4Q5T1C6 240 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 TMEM211Q6ICI0 200 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 LCN8Q6JVE9 175 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 PGBD2Q6P3X8 592 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 C6orf89Q6UWU4 347 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 TSPYL5Q86VY4 417 aaPredicted RBP6.42□□□□□ -1.38
MSH6-209ENST00000538136 KIF18BQ86Y91 864 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 H1FXQ92522 213 aaKnown RBP6.42□□□□□ -1.38
MSH6-209ENST00000538136 SLCO4A1Q96BD0 722 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 NRBF2Q96F24 287 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 OSBPL10Q9BXB5 764 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 SIRT5Q9NXA8 310 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 A4GNTQ9UNA3 340 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 HDGFL3Q9Y3E1 203 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 A0A1B0GVI7 797 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 FFAR1O14842 300 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 CLPXO76031 633 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 THBS1P07996 1170 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 SBK2P0C263 348 aa6.42□□□□□ -1.38
MSH6-209ENST00000538136 MRPS15P82914 257 aaKnown RBP6.42□□□□□ -1.38
MSH6-209ENST00000538136 MVKQ03426 396 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms