RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	TUFM	P49411	452 aa	Known RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	PRKX	P51817	358 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	ERVK-16	P61578	105 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	TSPAN5	P62079	268 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	RPS14	P62263	151 aa	Known RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	TNNC1	P63316	161 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	ZNF154	Q13106	437 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	KIAA0141	Q14154	515 aa	Predicted RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	CASP8	Q14790	479 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	ANGPT1	Q15389	498 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	BCL2A1	Q16548	175 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	UPP1	Q16831	310 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	DGUOK	Q16854	277 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	EIPR1	Q53HC9	387 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	FFAR4	Q5NUL3	377 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	C6orf183	Q5T699	404 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	STUM	Q69YW2	141 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	ULK3	Q6PHR2	472 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	CCDC137	Q6PK04	289 aa	Known RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	NDUFAF7	Q7L592	441 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	HDDC2	Q7Z4H3	204 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	RBM45	Q8IUH3	476 aa	Known RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	NUDCD3	Q8IVD9	361 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	SAMD12	Q8N8I0	201 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	FBXO36	Q8NEA4	188 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	OR10G7	Q8NGN6	311 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	OR9A4	Q8NGU2	314 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	ENKUR	Q8TC29	256 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	SPPL2A	Q8TCT8	520 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	ZPLD1	Q8TCW7	415 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	SETD7	Q8WTS6	366 aa	Known RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	MRPS31	Q92665	395 aa	Known RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	OPTN	Q96CV9	577 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	CELF6	Q96J87	481 aa	Known RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	JSRP1	Q96MG2	331 aa	Predicted RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	XPO6	Q96QU8	1125 aa	Known RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	ZNF300	Q96RE9	604 aa	Predicted RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	SELENOS	Q9BQE4	189 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	C9orf16	Q9BUW7	83 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	PRRG3	Q9BZD7	231 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	TRIM15	Q9C019	465 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	RAB1B	Q9H0U4	201 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	OR52A5	Q9H2C5	316 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	PPDPF	Q9H3Y8	114 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	RNF41	Q9H4P4	317 aa	Predicted RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	ELOVL2	Q9NXB9	296 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	EHF	Q9NZC4	300 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	NUDT4	Q9NZJ9	180 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	THYN1	Q9P016	225 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	ERVW-1	Q9UQF0	538 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	PYGO1	Q9Y3Y4	419 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	KPTN	Q9Y664	436 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	CSNK1G3	Q9Y6M4	447 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	ZNF609	O15014	1411 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	BCOR	Q6W2J9	1755 aa		3.76	□□□□□ -1.81
ATM-223	ENST00000533979	RANBP2	P49792	3224 aa	Known RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	DICER1	Q9UPY3	1922 aa	Known RBP	3.76	□□□□□ -1.81
ATM-223	ENST00000533979	SCN7A	Q01118	1682 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	NDUFAF8	A1L188	74 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	VSTM2B	A6NLU5	285 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	OR5K4	A6NMS3	321 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979		H7C423	109 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979		M0R3G1	203 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	AIM2	O14862	343 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	ZBTB5	O15062	677 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	ZNF749	O43361	778 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	FCN3	O75636	299 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	ZFAND5	O76080	213 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	OR7A10	O76100	309 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	ERLIN2	O94905	339 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	RNH1	P13489	461 aa	Known RBP	3.75	□□□□□ -1.81
ATM-223	ENST00000533979	SERPINA2	P20848	420 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	CFHR2	P36980	270 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	LEP	P41159	167 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	NPBWR2	P48146	333 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	CX3CR1	P49238	355 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	TMED10	P49755	219 aa	Known RBP	3.75	□□□□□ -1.81
ATM-223	ENST00000533979	MFAP2	P55001	183 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	PSMD4	P55036	377 aa	Known RBP	3.75	□□□□□ -1.81
ATM-223	ENST00000533979	RIPK4	P57078	832 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	PSMC5	P62195	406 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	POLR2G	P62487	172 aa	Known RBP eCLIP	3.75	□□□□□ -1.81
ATM-223	ENST00000533979	DMC1	Q14565	340 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	CYP51A1	Q16850	503 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	HLA-B	Q31612	363 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	CARD16	Q5EG05	197 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	MUC21	Q5SSG8	566 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	C3P1	Q6ZMU1	363 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	ASCL5	Q7RTU5	278 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	FAM122B	Q7Z309	247 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	GTSCR1	Q86UQ5	136 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	CARM1	Q86X55	608 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	APRG1	Q8IVJ8	170 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	RAB42	Q8N4Z0	105 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	MS4A15	Q8N5U1	240 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	CSNK1A1L	Q8N752	337 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	ZNF491	Q8N8L2	437 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	SUMF1	Q8NBK3	374 aa		3.75	□□□□□ -1.81
ATM-223	ENST00000533979	PRSS33	Q8NF86	280 aa		3.75	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms