RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 HOXC4P09017 264 aaPredicted RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 FAM157BP0CG42 384 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 PRSS56P0CW18 603 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 PGA3P0DJD8 388 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 SPP1P10451 314 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 CSNK2A1P68400 391 aaPredicted RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 ZIC1Q15915 447 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 DEFB134Q4QY38 66 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 VAX1Q5SQQ9 334 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 ATPAF1Q5TC12 328 aaPredicted RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 FIGLAQ6QHK4 219 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 UNQ6126/PRO20091Q6UXV3 157 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 SYT13Q7L8C5 426 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 CTU1Q7Z7A3 348 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 ANGPTL5Q86XS5 388 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 LINC00469Q8N7U9 141 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 CSNK2A3Q8NEV1 391 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 GLYATL2Q8WU03 294 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 APOBEC4Q8WW27 367 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 LIPHQ8WWY8 451 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 OR1F2PQ96R84 312 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 USB1Q9BQ65 265 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 EIF5A2Q9GZV4 153 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 SRA1Q9HD15 236 aaKnown RBP3.71□□□□□ -1.82
SOX6-217ENST00000533870 ZFP64Q9NPA5 681 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 PARPBPQ9NWS1 579 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 NTMQ9P121 344 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 TAAR2Q9P1P5 351 aa3.71□□□□□ -1.82
SOX6-217ENST00000533870 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 PPP5D1E7EU14 171 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 RPP14O95059 124 aaKnown RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 MBPP02686 304 aaPredicted RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 SERPINF1P36955 418 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 ZNF84P51523 738 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 HAGHQ16775 308 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 HYAL4Q2M3T9 481 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 GDF6Q6KF10 455 aaPredicted RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 SEMA6DQ8NFY4 1073 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 SLC26A10Q8NG04 563 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 OR51S1Q8NGJ8 323 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 OR2G2Q8NGZ5 317 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 MRGPRX4Q96LA9 322 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 HCAR1Q9BXC0 346 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 NMES1Q9C002 83 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 GDE1Q9NZC3 331 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 METTL1Q9UBP6 276 aaKnown RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 LPAR3Q9UBY5 353 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 SCN11AQ9UI33 1791 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 TLCD2A6NGC4 264 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 FAM74A7A6NL05 159 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 OR4C45A6NMZ5 311 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 SFT2D2O95562 160 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 HLA-HP01893 362 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 CD70P32970 193 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 EIF1P41567 113 aaKnown RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 SLC14A1Q13336 389 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 ENDOGQ14249 297 aaKnown RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 PSRC1Q6PGN9 363 aaPredicted RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 TMPPEQ6ZT21 453 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 GRINAQ7Z429 371 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 KLHDC1Q8N7A1 406 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 UBE2FQ969M7 185 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 TNFRSF13CQ96RJ3 184 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 LAT2Q9GZY6 243 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 METTL9Q9H1A3 318 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 KCNE5Q9UJ90 142 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 LOC105371267A0A1B0GV96 52 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 LGALS8O00214 317 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 MED6O75586 246 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 SERPINA5P05154 406 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 SNRNP70P08621 437 aaKnown RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 ALOX5APP20292 161 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 RPL12P30050 165 aaKnown RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 THBS2P35442 1172 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 CCR6P51684 374 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 PCBD1P61457 104 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 HTRA3P83110 453 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 TIAL1Q01085 375 aaKnown RBP eCLIP3.7□□□□□ -1.82
SOX6-217ENST00000533870 SLC17A1Q14916 467 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 ZNF141Q15928 474 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 TAF9Q16594 264 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 ST3GAL2Q16842 350 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 MIDNQ504T8 468 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 EEF1A1P5Q5VTE0 462 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 METRNLQ641Q3 311 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 ZNF660Q6AZW8 331 aaPredicted RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 C17orf99Q6UX52 265 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 UTS2BQ765I0 119 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 OR11G2Q8NGC1 345 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 PPP1R35Q8TAP8 253 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 NUDCD2Q8WVJ2 157 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 TMED6Q8WW62 240 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 PMEPA1Q969W9 287 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 SLAMF9Q96A28 289 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 SLC35B3Q9H1N7 401 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 CTSFQ9UBX1 484 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 OR52A1Q9UKL2 312 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 LAMP3Q9UQV4 416 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 NOSIPQ9Y314 301 aaKnown RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 UBE2J1Q9Y385 318 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms