RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 MYEF2Q9P2K5 600 aaKnown RBP10.61□□□□□ -0.71
CAPN1-223ENST00000533079 OPN4Q9UHM6 478 aa10.61□□□□□ -0.71
CAPN1-223ENST00000533079 IGHV1-69-2A0A0G2JMI3 117 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 LOC102725191A0A1B0GVB3 256 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 C17orf100A8MU93 164 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 UBL3O95164 117 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 HLA-HP01893 362 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 NAT2P11245 290 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 CD79AP11912 226 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 PPIBP23284 216 aaKnown RBP10.6□□□□□ -0.71
CAPN1-223ENST00000533079 VHLP40337 213 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 RAD52P43351 418 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 MVKQ03426 396 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 C1DQ13901 141 aaKnown RBP10.6□□□□□ -0.71
CAPN1-223ENST00000533079 SYPL1Q16563 259 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 ARMCX4Q5H9R4 360 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 FAM209AQ5JX71 171 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 RNF220Q5VTB9 566 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 TMEM154Q6P9G4 183 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 LRP11Q86VZ4 500 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 CALHM3Q86XJ0 350 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 MSRB3Q8IXL7 192 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 CADM2Q8N3J6 435 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 TRIML2Q8N7C3 387 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 RNF148Q8N7C7 305 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 SIGLECL1Q8N7X8 197 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 ADPRHL1Q8NDY3 354 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 BHLHE22Q8NFJ8 381 aaPredicted RBP10.6□□□□□ -0.71
CAPN1-223ENST00000533079 RAB1CQ92928 201 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 LRR1Q96L50 414 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 ZNF583Q96ND8 569 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 KCTD14Q9BQ13 255 aaPredicted RBP10.6□□□□□ -0.71
CAPN1-223ENST00000533079 SLC35A5Q9BS91 424 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 VCX3BQ9H321 246 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 KAT8Q9H7Z6 458 aaKnown RBP10.6□□□□□ -0.71
CAPN1-223ENST00000533079 GORASP2Q9H8Y8 452 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 B3GAT2Q9NPZ5 323 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 ARMC1Q9NVT9 282 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 SLCO1C1Q9NYB5 712 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 B3GAT1Q9P2W7 334 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 DUSP13Q9UII6 198 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 WIPI2Q9Y4P8 454 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 SNX13Q9Y5W8 968 aa10.6□□□□□ -0.71
CAPN1-223ENST00000533079 IGLV3-9A0A075B6K5 115 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 RFXANKO14593 260 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 OR2T1O43869 369 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 SEC14L2O76054 403 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 MT-ND5P03915 603 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 ACAA2P42765 397 aaKnown RBP10.59□□□□□ -0.71
CAPN1-223ENST00000533079 MAGEB1P43366 347 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 KLF3P57682 345 aaPredicted RBP10.59□□□□□ -0.71
CAPN1-223ENST00000533079 RABL3Q5HYI8 236 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 AVPI1Q5T686 147 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 RGS7BPQ6MZT1 257 aaPredicted RBP10.59□□□□□ -0.71
CAPN1-223ENST00000533079 ZNF813Q6ZN06 617 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 PQLC1Q8N2U9 271 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 ANKFN1Q8N957 763 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 PAPD5Q8NDF8 572 aaKnown RBP10.59□□□□□ -0.71
CAPN1-223ENST00000533079 PYDC1Q8WXC3 89 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 C22orf15Q8WYQ4 148 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 ZNF837Q96EG3 531 aaPredicted RBP10.59□□□□□ -0.71
CAPN1-223ENST00000533079 LRGUKQ96M69 825 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 ECSITQ9BQ95 431 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 PTDSS2Q9BVG9 487 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 SPATA9Q9BWV2 254 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 PCDHAC1Q9H158 963 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 HINT3Q9NQE9 182 aaKnown RBP10.59□□□□□ -0.71
CAPN1-223ENST00000533079 PLEK2Q9NYT0 353 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 SLC25A37Q9NYZ2 338 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 CALML5Q9NZT1 146 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 MAGEL2Q9UJ55 1249 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 NUP50Q9UKX7 468 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 AP4S1Q9Y587 144 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 MMP24Q9Y5R2 645 aa10.59□□□□□ -0.71
CAPN1-223ENST00000533079 A0A1B0GUS0 222 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 EVPLLA8MZ36 301 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 TRAF3IP2O43734 574 aaPredicted RBP10.58□□□□□ -0.72
CAPN1-223ENST00000533079 CDC14BO60729 498 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 NR2F1P10589 423 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 GPX2P18283 190 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 ZFP36P26651 326 aaKnown RBP10.58□□□□□ -0.72
CAPN1-223ENST00000533079 MSX2P35548 267 aaPredicted RBP10.58□□□□□ -0.72
CAPN1-223ENST00000533079 RPS5P46782 204 aaKnown RBP10.58□□□□□ -0.72
CAPN1-223ENST00000533079 GZMMP51124 257 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 CCL8P80075 99 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 BAMBIQ13145 260 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 CAMK2DQ13557 499 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 MOGQ16653 247 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 HFEQ30201 348 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 FAM69AQ5T7M9 428 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 ZNF836Q6ZNA1 936 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 SERPINA11Q86U17 422 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 SPATA24Q86W54 205 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 ANKRD46Q86W74 232 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 RNF130Q86XS8 419 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 FAM156AQ8NDB6 213 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 NRG4Q8WWG1 115 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 SLC35B4Q969S0 331 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 SLC25A36Q96CQ1 311 aa10.58□□□□□ -0.72
CAPN1-223ENST00000533079 GAL3ST1Q99999 423 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms