RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 ZNF84P51523 738 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 RGS8P57771 180 aaPredicted RBP7.82□□□□□ -1.16
NEDD8-206ENST00000531430 RGNQ15493 299 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 SGCAQ16586 387 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 KLF17Q5JT82 389 aaPredicted RBP7.82□□□□□ -1.16
NEDD8-206ENST00000531430 ZNF627Q7L945 461 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 KRT73Q86Y46 540 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 KLHL36Q8N4N3 616 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 LSMEM1Q8N8F7 131 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 SYT14Q8NB59 555 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 ADPRHL1Q8NDY3 354 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 CPEB3Q8NE35 698 aaKnown RBP7.82□□□□□ -1.16
NEDD8-206ENST00000531430 DEFB108BQ8NET1 73 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 OR5J2Q8NH18 312 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 NFKBIDQ8NI38 313 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 SLC25A40Q8TBP6 338 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 GEMIN6Q8WXD5 167 aaKnown RBP7.82□□□□□ -1.16
NEDD8-206ENST00000531430 TMEM54Q969K7 222 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 VPS33AQ96AX1 596 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 SLC41A3Q96GZ6 507 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 C1orf147Q96MC9 270 aaPredicted RBP7.82□□□□□ -1.16
NEDD8-206ENST00000531430 SORT1Q99523 831 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 PKP2Q99959 881 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 SPATA5L1Q9BVQ7 753 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 C1orf198Q9H425 327 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 ZMAT3Q9HA38 289 aaKnown RBP7.82□□□□□ -1.16
NEDD8-206ENST00000531430 MEAF6Q9HAF1 191 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 NPHS2Q9NP85 383 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 CCNB1IP1Q9NPC3 277 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 MRPL39Q9NYK5 338 aaKnown RBP7.82□□□□□ -1.16
NEDD8-206ENST00000531430 PURGQ9UJV8 347 aaKnown RBP7.82□□□□□ -1.16
NEDD8-206ENST00000531430 NPTNQ9Y639 398 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 NOTCH1P46531 2555 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 C5orf49A4QMS7 147 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 KPNA4O00629 521 aaPredicted RBP7.81□□□□□ -1.16
NEDD8-206ENST00000531430 BIRC5O15392 142 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 TYROBPO43914 113 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 FSHBP01225 129 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 IGHV3-13P01766 116 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 RNASE1P07998 156 aaKnown RBP7.81□□□□□ -1.16
NEDD8-206ENST00000531430 STOMP27105 288 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 AQP1P29972 269 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 PRKAR1BP31321 381 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 MPV17P39210 176 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 POLR2JP52435 117 aaKnown RBP7.81□□□□□ -1.16
NEDD8-206ENST00000531430 CDH12P55289 794 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 TNFAIP6P98066 277 aaPredicted RBP7.81□□□□□ -1.16
NEDD8-206ENST00000531430 RUNDC3AQ59EK9 446 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 SPRNQ5BIV9 151 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 PABPC1L2AQ5JQF8 200 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 FAM209AQ5JX71 171 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 FAM91A1Q658Y4 838 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 C16orf87Q6PH81 154 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 C6orf89Q6UWU4 347 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 C1QL4Q86Z23 238 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 OR6X1Q8NH79 312 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 UBE2FQ969M7 185 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 SLC35B4Q969S0 331 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 TRIM44Q96DX7 344 aaPredicted RBP7.81□□□□□ -1.16
NEDD8-206ENST00000531430 SLC25A44Q96H78 314 aaPredicted RBP7.81□□□□□ -1.16
NEDD8-206ENST00000531430 DIRC2Q96SL1 478 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 ROPN1BQ9BZX4 212 aaPredicted RBP7.81□□□□□ -1.16
NEDD8-206ENST00000531430 OR2J1Q9GZK6 312 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 SLITRK2Q9H156 845 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 RAD21L1Q9H4I0 556 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 NANOGQ9H9S0 305 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 ROPN1Q9HAT0 212 aaPredicted RBP7.81□□□□□ -1.16
NEDD8-206ENST00000531430 MSL2Q9HCI7 577 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 BCL2L10Q9HD36 194 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 DCAF16Q9NXF7 216 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 PDP1Q9P0J1 537 aaPredicted RBP7.81□□□□□ -1.16
NEDD8-206ENST00000531430 LGALS13Q9UHV8 139 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 INSIG2Q9Y5U4 225 aa7.81□□□□□ -1.16
NEDD8-206ENST00000531430 MDFIC2A0A1B0GVS7 189 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 ZSCAN5BA6NJL1 495 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 TRPC5OSA6NMA1 111 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 MCIDASD6RGH6 385 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 BLOC1S5-TXNDC5H3BN57 136 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 RGS16O15492 202 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-206ENST00000531430 HOXA3O43365 443 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-206ENST00000531430 TIMM8AO60220 97 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-206ENST00000531430 UBOX5O94941 541 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 ZCCHC18P0CG32 403 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 IGHV4-38-2P0DP08 117 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 ETS2P15036 469 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 CDAP32320 146 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 GDI2P50395 445 aaKnown RBP7.8□□□□□ -1.16
NEDD8-206ENST00000531430 SEC61A1P61619 476 aaKnown RBP7.8□□□□□ -1.16
NEDD8-206ENST00000531430 CDK6Q00534 326 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 BST1Q10588 318 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 KRT71Q3SY84 523 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 GCNT6Q5T4J0 391 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 HHATQ5VTY9 493 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 OGFOD2Q6N063 350 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 REEP3Q6NUK4 255 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 TTC33Q6PID6 262 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-206ENST00000531430 BRICD5Q6PL45 260 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 SLC2A7Q6PXP3 512 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 UNQ6126/PRO20091Q6UXV3 157 aa7.8□□□□□ -1.16
NEDD8-206ENST00000531430 NHLRC1Q6VVB1 395 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms