RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 ZMYND11Q15326 602 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 SLC36A2Q495M3 483 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 PDCD4Q53EL6 469 aaKnown RBP9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 GPR157Q5UAW9 335 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 C8orf74Q6P047 294 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 BRD3OSQ6XYD6 125 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 ZNF836Q6ZNA1 936 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 GDPGP1Q6ZNW5 385 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 PXKQ7Z7A4 578 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 ANKRD46Q86W74 232 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 VRK2Q86Y07 508 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 C10orf107Q8IVU9 208 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 CLIP4Q8N3C7 705 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 TRIML2Q8N7C3 387 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 CCDC63Q8NA47 563 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 ICA1LQ8NDH6 482 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 TMEM54Q969K7 222 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 SLC35A5Q9BS91 424 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 SSBP3Q9BWW4 388 aaPredicted RBP9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 RASSF4Q9H2L5 321 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 GLTPQ9NZD2 209 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 CALML5Q9NZT1 146 aa9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 PSMC3IPQ9P2W1 217 aaPredicted RBP9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 EIF3KQ9UBQ5 218 aaKnown RBP9.73□□□□□ -0.85
AMBRA1-207ENST00000529553 ZSCAN5BA6NJL1 495 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 IFNL4K9M1U5 179 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 GPR37O15354 613 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 GPR137BO60478 399 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 NQO1P15559 274 aaKnown RBP9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 FUT4P22083 530 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 APLNRP35414 380 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 TNFAIP6P98066 277 aaPredicted RBP9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 CDK5R2Q13319 367 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 TTMPQ5BVD1 217 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 COX20Q5RI15 118 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 THEM4Q5T1C6 240 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 ZNF774Q6NX45 483 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 MIER2Q8N344 545 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 KLF14Q8TD94 323 aaPredicted RBP9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 GEMIN6Q8WXD5 167 aaKnown RBP9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 TESCQ96BS2 214 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 TUBGCP3Q96CW5 907 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 PLEKHA8Q96JA3 519 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 SH3GL3Q99963 347 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 RHOXF2Q9BQY4 288 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 SPATA9Q9BWV2 254 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 TMEM38BQ9NVV0 291 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 NOP53Q9NZM5 478 aaKnown RBP9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 MIOXQ9UGB7 285 aa9.72□□□□□ -0.85
AMBRA1-207ENST00000529553 A0A1W2PPM1 405 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 CEACAM18A8MTB9 384 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 TSPAN9O75954 239 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 FSTL3O95633 263 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 CHRNGP07510 517 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 TNFSF4P23510 183 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 AHCYP23526 432 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 MPV17P39210 176 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 PUDPQ08623 228 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 BST1Q10588 318 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 SPRNQ5BIV9 151 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 LRFN4Q6PJG9 635 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 WDR88Q6ZMY6 472 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 Q6ZSV7 163 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 SLC16A14Q7RTX9 510 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 ZER1Q7Z7L7 766 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 SERPINA11Q86U17 422 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 LRRC34Q8IZ02 419 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 LSMEM1Q8N8F7 131 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 OR6X1Q8NH79 312 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 IPCEF1Q8WWN9 437 aaPredicted RBP9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 MAGEB18Q96M61 343 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 WWC2-AS2Q96NR7 200 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 CCDC115Q96NT0 180 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 ZIM3Q96PE6 472 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 SIGLEC11Q96RL6 698 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 ARHGDIGQ99819 225 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 ASPNQ9BXN1 380 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 DCAF16Q9NXF7 216 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 MRPL39Q9NYK5 338 aaKnown RBP9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 KIF17Q9P2E2 1029 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 KLHL14Q9P2G3 628 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 RPS6KB2Q9UBS0 482 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 BTNL2Q9UIR0 455 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 ZNF443Q9Y2A4 671 aaPredicted RBP9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 IFT52Q9Y366 437 aa9.71□□□□□ -0.86
AMBRA1-207ENST00000529553 CCDC154A6NI56 674 aa9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 H0YL77 283 aa9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 IER3P46695 156 aa9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 GNB2P62879 340 aa9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 MAPK11Q15759 364 aa9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 DPY19L1Q2PZI1 675 aa9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 TMEM255AQ5JRV8 349 aa9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 TRMT10CQ7L0Y3 403 aaKnown RBP9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 PTOV1Q86YD1 416 aa9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 KLBQ86Z14 1044 aa9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 RBM15BQ8NDT2 890 aaKnown RBP9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 VANGL1Q8TAA9 524 aaPredicted RBP9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 DNAJA4Q8WW22 397 aaPredicted RBP9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 IFT81Q8WYA0 676 aa9.7□□□□□ -0.86
AMBRA1-207ENST00000529553 EPYCQ99645 322 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms