RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 MTNR1AP48039 350 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 POLR2JP52435 117 aaKnown RBP9.82□□□□□ -0.84
CMTM1-211ENST00000528484 CLRN1P58418 232 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 OR1Q1Q15612 314 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 NRN1LQ496H8 165 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 GTDC1Q4AE62 458 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 HHATQ5VTY9 493 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 REEP3Q6NUK4 255 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 DHRS4L2Q6PKH6 230 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 HIST3H2AQ7L7L0 130 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 HDDC2Q7Z4H3 204 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 C1orf174Q8IYL3 243 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 KLHL36Q8N4N3 616 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 SPICQ8N5J4 248 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 SYT14Q8NB59 555 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 HIPK4Q8NE63 616 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 OR4K5Q8NGD3 323 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 NFKBIDQ8NI38 313 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 HIST1H2ACQ93077 130 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 TMEM54Q969K7 222 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 VPS33AQ96AX1 596 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 SLC25A44Q96H78 314 aaPredicted RBP9.82□□□□□ -0.84
CMTM1-211ENST00000528484 MOGAT1Q96PD6 335 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 TSPAN32Q96QS1 320 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 DIRC2Q96SL1 478 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 MS4A7Q9GZW8 240 aaPredicted RBP9.82□□□□□ -0.84
CMTM1-211ENST00000528484 WDR55Q9H6Y2 383 aaPredicted RBP9.82□□□□□ -0.84
CMTM1-211ENST00000528484 PLEK2Q9NYT0 353 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 OPN4Q9UHM6 478 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 AUP1Q9Y679 476 aa9.82□□□□□ -0.84
CMTM1-211ENST00000528484 PRKDCP78527 4128 aaKnown RBP9.81□□□□□ -0.84
CMTM1-211ENST00000528484 A0A0B4J2E0 115 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 A0A1B0GX12 115 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 MCIDASD6RGH6 385 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 DHHO43323 396 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 MFN2O95140 757 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 FSHBP01225 129 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 RNASE1P07998 156 aaKnown RBP9.81□□□□□ -0.84
CMTM1-211ENST00000528484 NUDT7P0C024 238 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 KITP10721 976 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 BMP2P12643 396 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 TNFSF4P23510 183 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 SLC6A2P23975 617 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 CDH12P55289 794 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 STX1BP61266 288 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 ERVS71-1P61550 626 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 CDK6Q00534 326 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 BST1Q10588 318 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 PAQR4Q8N4S7 273 aaPredicted RBP9.81□□□□□ -0.84
CMTM1-211ENST00000528484 DVL3Q92997 716 aaPredicted RBP9.81□□□□□ -0.84
CMTM1-211ENST00000528484 DUX5Q96PT3 197 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 SLITRK2Q9H156 845 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 CENPHQ9H3R5 247 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 CCNB1IP1Q9NPC3 277 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 NANSQ9NR45 359 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 THAP1Q9NVV9 213 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 PURGQ9UJV8 347 aaKnown RBP9.81□□□□□ -0.84
CMTM1-211ENST00000528484 ZDHHC8Q9ULC8 765 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 CORO2BQ9UQ03 480 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 CACNG2Q9Y698 323 aa9.81□□□□□ -0.84
CMTM1-211ENST00000528484 LRRN3E7EW58 273 aa9.8□□□□□ -0.84
CMTM1-211ENST00000528484 UBDO15205 165 aa9.8□□□□□ -0.84
CMTM1-211ENST00000528484 QDPRP09417 244 aa9.8□□□□□ -0.84
CMTM1-211ENST00000528484 UMPSP11172 480 aa9.8□□□□□ -0.84
CMTM1-211ENST00000528484 MAKP20794 623 aa9.8□□□□□ -0.84
CMTM1-211ENST00000528484 GDI2P50395 445 aaKnown RBP9.8□□□□□ -0.84
CMTM1-211ENST00000528484 MELKQ14680 651 aa9.8□□□□□ -0.84
CMTM1-211ENST00000528484 ZNF613Q6PF04 617 aa9.8□□□□□ -0.84
CMTM1-211ENST00000528484 TTC33Q6PID6 262 aaPredicted RBP9.8□□□□□ -0.84
CMTM1-211ENST00000528484 ZER1Q7Z7L7 766 aa9.8□□□□□ -0.84
CMTM1-211ENST00000528484 ARMC8Q8IUR7 673 aa9.8□□□□□ -0.84
CMTM1-211ENST00000528484 FGFBP3Q8TAT2 258 aa9.8□□□□□ -0.84
CMTM1-211ENST00000528484 TMEM109Q9BVC6 243 aa9.8□□□□□ -0.84
CMTM1-211ENST00000528484 SDR39U1Q9NRG7 319 aaPredicted RBP9.8□□□□□ -0.84
CMTM1-211ENST00000528484 STX18Q9P2W9 335 aaKnown RBP9.8□□□□□ -0.84
CMTM1-211ENST00000528484 OR5V1Q9UGF6 321 aa9.8□□□□□ -0.84
CMTM1-211ENST00000528484 A0A1B0GUS0 222 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 A0A1W2PRG6 482 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 EVPLLA8MZ36 301 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 H3BSA7 217 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 CLDN34H7C241 214 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 CHP2O43745 196 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 FMO6PO60774 539 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 UBOX5O94941 541 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 IGHV1-46P01743 117 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 IGHMP01871 453 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 SBK2P0C263 348 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 NR2C1P13056 603 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 ZFP36P26651 326 aaKnown RBP9.79□□□□□ -0.84
CMTM1-211ENST00000528484 STOMP27105 288 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 GUCA1AP43080 201 aaPredicted RBP9.79□□□□□ -0.84
CMTM1-211ENST00000528484 ARHGDIAP52565 204 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 ZNF154Q13106 437 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 SCARB2Q14108 478 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 ESCO2Q56NI9 601 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 SPATA46Q5T0L3 261 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 ARL9Q6T311 187 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 WDR88Q6ZMY6 472 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 C17orf107Q6ZR85 190 aa9.79□□□□□ -0.84
CMTM1-211ENST00000528484 NANOGNBQ7Z5D8 188 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms