RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 IL5P05113 134 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 IFNGR1P15260 489 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 DCTDP32321 178 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 OR1D5P58170 312 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 ROM1Q03395 351 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 LGALSLQ3ZCW2 172 aaPredicted RBP19.16■□□□□ 0.66
VPS28-205ENST00000526204 ESCO2Q56NI9 601 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 TEX30Q5JUR7 227 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 SLC25A25Q6KCM7 469 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 KCTD18Q6PI47 426 aaPredicted RBP19.16■□□□□ 0.66
VPS28-205ENST00000526204 CHRDL2Q6WN34 429 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 Q6ZTK2 550 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 NLRC3Q7RTR2 1065 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 GRINAQ7Z429 371 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 ANGPTL6Q8NI99 470 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 RNF128Q8TEB7 428 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 AMELYQ99218 206 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 ZNF576Q9H609 170 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 EIF3KQ9UBQ5 218 aaKnown RBP19.16■□□□□ 0.66
VPS28-205ENST00000526204 NUP210LQ5VU65 1888 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 PRUNE2Q8WUY3 3088 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 TTLL8A6PVC2 850 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 SLC16A7O60669 478 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 EFNA3P52797 238 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 C1orf140Q5VVS0 124 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 LRRC69Q6ZNQ3 347 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 ZNF441Q8N8Z8 693 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 STK35Q8TDR2 534 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 ULBP3Q9BZM4 244 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 ING1Q9UK53 422 aaPredicted RBP19.16■□□□□ 0.66
VPS28-205ENST00000526204 EML5Q05BV3 1969 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 SNRPGP15A8MWD9 76 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 H7C417 338 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 NUDT21O43809 227 aaKnown RBP19.15■□□□□ 0.66
VPS28-205ENST00000526204 DUX1O43812 170 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 OR2T1O43869 369 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 SNAPC5O75971 98 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 IGHMP01871 453 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 SDHBP21912 280 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 SELENOPP49908 381 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 ZNF81P51508 661 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 ODF4Q2M2E3 257 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 LINC00303Q3SY05 128 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 ARHGAP40Q5TG30 622 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 PRAMEF17Q5VTA0 474 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 YOD1Q5VVQ6 348 aaPredicted RBP19.15■□□□□ 0.66
VPS28-205ENST00000526204 ADGRG3Q86Y34 549 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 GPR119Q8TDV5 335 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 PIGKQ92643 395 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 VN1R1Q9GZP7 353 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 MTFP1Q9UDX5 166 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 MKL2Q9ULH7 1088 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 MPDZO75970 2070 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 IGLV1-36A0A0B4J1U3 117 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 A0A1B0GX78 115 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 GGT3PA6NGU5 568 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 FADS1O60427 444 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 CREBL2O60519 120 aaPredicted RBP19.15■□□□□ 0.66
VPS28-205ENST00000526204 PLGP00747 810 aaPredicted RBP19.15■□□□□ 0.66
VPS28-205ENST00000526204 IFNA7P01567 189 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 TMIGD3P0DMS9 266 aaPredicted RBP19.15■□□□□ 0.66
VPS28-205ENST00000526204 PTHLHP12272 177 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 CCKBRP32239 447 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 RAD52P43351 418 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 P2RX3P56373 397 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 KANSL1Q7Z3B3 1105 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 MEIOBQ8N635 442 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 OR8K3Q8NH51 312 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 DPYSL5Q9BPU6 564 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 SLC17A5Q9NRA2 495 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 SEMA5BQ9P283 1151 aa19.15■□□□□ 0.66
VPS28-205ENST00000526204 LINC00862A6NCI5 91 aa19.14■□□□□ 0.65
VPS28-205ENST00000526204 C17orf51A8MQB3 221 aa19.14■□□□□ 0.65
VPS28-205ENST00000526204 PIAS2O75928 621 aa19.14■□□□□ 0.65
VPS28-205ENST00000526204 CSF1P09603 554 aa19.14■□□□□ 0.65
VPS28-205ENST00000526204 FOLR1P15328 257 aa19.14■□□□□ 0.65
VPS28-205ENST00000526204 INSM1Q01101 510 aaPredicted RBP19.14■□□□□ 0.65
VPS28-205ENST00000526204 SLC35D2Q76EJ3 337 aa19.14■□□□□ 0.65
VPS28-205ENST00000526204 DNAJA3Q96EY1 480 aa19.14■□□□□ 0.65
VPS28-205ENST00000526204 SLC41A2Q96JW4 573 aa19.14■□□□□ 0.65
VPS28-205ENST00000526204 SLC22A23A1A5C7 686 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 H0YC42 278 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 PLPP3O14495 311 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 AHSA1O95433 338 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 SPARCP09486 303 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 C4BPBP20851 252 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 CRABP1P29762 137 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 SNTA1Q13424 505 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 TDGQ13569 410 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 RAB11BQ15907 218 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 KRT77Q7Z794 578 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 MISPQ8IVT2 679 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 PRSS58Q8IYP2 241 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 OR8H3Q8N146 312 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 ZNF454Q8N9F8 522 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 OR51D1Q8NGF3 324 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 MRPL22Q9NWU5 206 aaKnown RBP19.13■□□□□ 0.65
VPS28-205ENST00000526204 SLC17A2O00624 439 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 CTAG2O75638 210 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 ALDOBP05062 364 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms