RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 C11orf65Q8NCR3 313 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 HIPK4Q8NE63 616 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 NFKBIDQ8NI38 313 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 BBS10Q8TAM1 723 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 FAM216AQ8WUB2 273 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 RASSF5Q8WWW0 418 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 CCL17Q92583 94 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 SLC38A4Q969I6 547 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 SLC35B4Q969S0 331 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 ZNF75AQ96N20 296 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 MOGAT1Q96PD6 335 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 DCLRE1CQ96SD1 692 aaKnown RBP5.62□□□□□ -1.51
CD44-221ENST00000526000 FOXB1Q99853 325 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 SPATA5L1Q9BVQ7 753 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 ASPNQ9BXN1 380 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 TMPRSS13Q9BYE2 586 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 MUC13Q9H3R2 512 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 ARMC7Q9H6L4 198 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 C7orf69Q9H7B7 122 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 ZNF665Q9H7R5 613 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 CDH20Q9HBT6 801 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 B3GAT2Q9NPZ5 323 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 HINT3Q9NQE9 182 aaKnown RBP5.62□□□□□ -1.51
CD44-221ENST00000526000 ZNF224Q9NZL3 707 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.62□□□□□ -1.51
CD44-221ENST00000526000 SLAMF8Q9P0V8 285 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 FBXO9Q9UK97 447 aaPredicted RBP5.62□□□□□ -1.51
CD44-221ENST00000526000 PRPF19Q9UMS4 504 aaKnown RBP5.62□□□□□ -1.51
CD44-221ENST00000526000 RCE1Q9Y256 329 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 IFT52Q9Y366 437 aa5.62□□□□□ -1.51
CD44-221ENST00000526000 SOX21Q9Y651 276 aaPredicted RBP5.62□□□□□ -1.51
CD44-221ENST00000526000 IGHV3OR16-10A0A075B7F0 116 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 TRAV20A0A0B4J274 112 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 ISPDA4D126 451 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 PRORSD1PA6NEY8 169 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 FAM220BPB1ANY3 271 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 TMPRSS2O15393 492 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 AKAP8O43823 692 aaKnown RBP5.61□□□□□ -1.51
CD44-221ENST00000526000 OR2T1O43869 369 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 GMNNO75496 209 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 SERPINB7O75635 380 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 RP2O75695 350 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 UBOX5O94941 541 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 CH25HO95992 272 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 TFP02787 698 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 BGLAPP02818 100 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 ADORA3P0DMS8 318 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 T-ENOLP0DO92 83 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 MAKP20794 623 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 AQP1P29972 269 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 PCGF2P35227 344 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 CSNK1A1P48729 337 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 EVX1P49640 407 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 SELENOVP59797 346 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 CDK6Q00534 326 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 ZP4Q12836 540 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 MELKQ14680 651 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 OR1Q1Q15612 314 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 FXNQ16595 210 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 CYP51A1Q16850 503 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 SPRNQ5BIV9 151 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 MTX3Q5HYI7 312 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 ALG10BQ5I7T1 473 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 SPATA46Q5T0L3 261 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 FAM69AQ5T7M9 428 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 RNF220Q5VTB9 566 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 DCAF12L2Q5VW00 463 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 REEP3Q6NUK4 255 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 PATL1Q86TB9 770 aaKnown RBP5.61□□□□□ -1.51
CD44-221ENST00000526000 CALHM3Q86XJ0 350 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 KRT73Q86Y46 540 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 ZNF584Q8IVC4 421 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 SLC15A3Q8IY34 581 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 CCDC36Q8IYA8 594 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 C10orf111Q8N326 155 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 LRRC18Q8N456 261 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 SIGLECL1Q8N7X8 197 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 RBM15BQ8NDT2 890 aaKnown RBP5.61□□□□□ -1.51
CD44-221ENST00000526000 OR2T12Q8NG77 320 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 NANPQ8TBE9 248 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 SYNPRQ8TBG9 265 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 ZFAND2BQ8WV99 257 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 ZNF607Q96SK3 696 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 BTBD10Q9BSF8 475 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 RBM4Q9BWF3 364 aaKnown RBP5.61□□□□□ -1.51
CD44-221ENST00000526000 ZNF416Q9BWM5 594 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 TMEM27Q9HBJ8 222 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 G6PC2Q9NQR9 355 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 DECR2Q9NUI1 292 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 DDX28Q9NUL7 540 aaKnown RBP5.61□□□□□ -1.51
CD44-221ENST00000526000 SELENONQ9NZV5 590 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 ANGPT4Q9Y264 503 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 WNK2Q9Y3S1 2297 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 WIPI2Q9Y4P8 454 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 CORINQ9Y5Q5 1042 aa5.61□□□□□ -1.51
CD44-221ENST00000526000 SVEP1Q4LDE5 3571 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 DSPPQ9NZW4 1301 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 IGHV1-69-2A0A0G2JMI3 117 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 ELOVL7A1L3X0 281 aa5.6□□□□□ -1.51
CD44-221ENST00000526000 C17orf100A8MU93 164 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms