RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 OTUD3Q5T2D3 398 aaPredicted RBP4.54□□□□□ -1.68
SVIP-202ENST00000525670 PDSS1Q5T2R2 415 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 GKAP1Q5VSY0 366 aaPredicted RBP4.54□□□□□ -1.68
SVIP-202ENST00000525670 EEF1A1P5Q5VTE0 462 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 C1orf140Q5VVS0 124 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 PRAMEF8Q5VWM4 474 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 PRAMEF7Q5VXH5 474 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 CARD17Q5XLA6 110 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 WBP2NLQ6ICG8 309 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 DHRS4L2Q6PKH6 230 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 XKRXQ6PP77 449 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 ZNF474Q6S9Z5 364 aaPredicted RBP4.54□□□□□ -1.68
SVIP-202ENST00000525670 WDR88Q6ZMY6 472 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 MEPCEQ7L2J0 689 aaKnown RBP4.54□□□□□ -1.68
SVIP-202ENST00000525670 NET1Q7Z628 596 aaPredicted RBP4.54□□□□□ -1.68
SVIP-202ENST00000525670 PIGWQ7Z7B1 504 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 RANBP3LQ86VV4 465 aaPredicted RBP4.54□□□□□ -1.68
SVIP-202ENST00000525670 CALHM3Q86XJ0 350 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 DEFB107AQ8IZN7 70 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 FAM86B1Q8N7N1 296 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 TMEM99Q8N816 258 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 C11orf44Q8N8P7 122 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 LILRB4Q8NHJ6 448 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 PFN4Q8NHR9 129 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 ZPLD1Q8TCW7 415 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 BCAS4Q8TDM0 211 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 RNF128Q8TEB7 428 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 PROX1Q92786 737 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 CPNE4Q96A23 557 aaPredicted RBP4.54□□□□□ -1.68
SVIP-202ENST00000525670 DDIT4LQ96D03 193 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 STARD4Q96DR4 205 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 CMTM5Q96DZ9 223 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 KTI12Q96EK9 354 aaPredicted RBP4.54□□□□□ -1.68
SVIP-202ENST00000525670 LYZL4Q96KX0 146 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 ZNF583Q96ND8 569 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 ALKBH3Q96Q83 286 aaPredicted RBP4.54□□□□□ -1.68
SVIP-202ENST00000525670 ARHGDIGQ99819 225 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 GPATCH1Q9BRR8 931 aaKnown RBP4.54□□□□□ -1.68
SVIP-202ENST00000525670 SFXN3Q9BWM7 321 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 PCDHAC1Q9H158 963 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 ARMC7Q9H6L4 198 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 RNF122Q9H9V4 155 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 EFCAB1Q9HAE3 211 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 BCL2L10Q9HD36 194 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 SPAG4Q9NPE6 437 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 EXOSC3Q9NQT5 275 aaKnown RBP4.54□□□□□ -1.68
SVIP-202ENST00000525670 THUMPD1Q9NXG2 353 aaKnown RBP4.54□□□□□ -1.68
SVIP-202ENST00000525670 SELENONQ9NZV5 590 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 TAGLN3Q9UI15 199 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 SLC7A7Q9UM01 511 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 IFT52Q9Y366 437 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 ZNF175Q9Y473 711 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 SNX13Q9Y5W8 968 aa4.54□□□□□ -1.68
SVIP-202ENST00000525670 SPIN1Q9Y657 262 aaPredicted RBP4.54□□□□□ -1.68
SVIP-202ENST00000525670 IGKV1D-42A0A075B6H8 117 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 A0A0B4J2E0 115 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 A0A1B0GX12 115 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 PRORSD1PA6NEY8 169 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 FAM90A8PA6NJQ4 464 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 ADAMDEC1O15204 470 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 SLC22A2O15244 555 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 SS18L1O75177 396 aaPredicted RBP4.53□□□□□ -1.68
SVIP-202ENST00000525670 SERPINB7O75635 380 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 RAD51DO75771 328 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 SOX30O94993 753 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 RCBTB2O95199 551 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 FAM107AO95990 144 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 TOMM40O96008 361 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 THY1P04216 161 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 FAM90A13PP0C7W8 464 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 FAM90A24PP0C7X0 464 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 PNMTP11086 282 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 FCGR2AP12318 317 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 POU2F1P14859 743 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 ETS2P15036 469 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 NQO1P15559 274 aaKnown RBP4.53□□□□□ -1.68
SVIP-202ENST00000525670 BTF3P20290 206 aaKnown RBP4.53□□□□□ -1.68
SVIP-202ENST00000525670 ATP6V1B2P21281 511 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 GRPRP30550 384 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 OPRM1P35372 400 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 TIMP3P35625 211 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 APOBEC1P41238 236 aaKnown RBP4.53□□□□□ -1.68
SVIP-202ENST00000525670 UGT2B15P54855 530 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 RPS16P62249 146 aaKnown RBP4.53□□□□□ -1.68
SVIP-202ENST00000525670 TXNL4AP83876 142 aaKnown RBP4.53□□□□□ -1.68
SVIP-202ENST00000525670 TLE4Q04727 773 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 RBBP4Q09028 425 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 MELKQ14680 651 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 NRF1Q16656 503 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 SLC25A35Q3KQZ1 300 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 SLC25A53Q5H9E4 307 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 COQ5Q5HYK3 327 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 FGD3Q5JSP0 725 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 INTS11Q5TA45 600 aaKnown RBP4.53□□□□□ -1.68
SVIP-202ENST00000525670 ABLIM2Q6H8Q1 611 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 MZT2AQ6P582 158 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 TMPPEQ6ZT21 453 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 ARPINQ7Z6K5 226 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 PATL1Q86TB9 770 aaKnown RBP4.53□□□□□ -1.68
SVIP-202ENST00000525670 IGFN1Q86VF2 1251 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms