RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 PPIAL4CA0A0B4J2A2 164 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 A0A1B0GUS0 222 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 C5orf49A4QMS7 147 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 TMEM247A6NEH6 219 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 SLC22A31A6NKX4 558 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 PPIAL4DF5H284 164 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 RFXANKO14593 260 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 TM9SF1O15321 606 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 IGHV3-13P01766 116 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 BGLAPP02818 100 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 NUDT7P0C024 238 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 PPIAL4FP0DN26 164 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 SELEP16581 610 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 IL12AP29459 219 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 SLC6A9P48067 706 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 PCBP3P57721 371 aaKnown RBP9.78□□□□□ -0.84
SDCBP-211ENST00000523441 NCALDP61601 193 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 ZMYND11Q15326 602 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 FAM189A2Q15884 450 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 OCLNQ16625 522 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 TUSC1Q2TAM9 212 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 SLC36A2Q495M3 483 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 GTDC1Q4AE62 458 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 C6orf89Q6UWU4 347 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 ZNF627Q7L945 461 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 NET1Q7Z628 596 aaPredicted RBP9.78□□□□□ -0.84
SDCBP-211ENST00000523441 HOMEZQ8IX15 550 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 ZNF101Q8IZC7 436 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 SCAIQ8N9R8 606 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 CPEB3Q8NE35 698 aaKnown RBP9.78□□□□□ -0.84
SDCBP-211ENST00000523441 MNS1Q8NEH6 495 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 ABHD4Q8TB40 342 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 MAL2Q969L2 176 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 SLC30A2Q9BRI3 323 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 TXLNGYQ9BZA5 131 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 NUF2Q9BZD4 464 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 NANOGQ9H9S0 305 aa9.78□□□□□ -0.84
SDCBP-211ENST00000523441 A0A0G2JPF8 293 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 IGHV3-64DA0A0J9YX35 117 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 LOC102725191A0A1B0GVB3 256 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 HNRNPCL2B2RXH8 293 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 SRRM5B3KS81 715 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 HNRNPCL3B7ZW38 293 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 C5orf58C9J3I9 102 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 C3orf80F5H4A9 247 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 PLPP3O14495 311 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 DHHO43323 396 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 RNF13O43567 381 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 TIMM8AO60220 97 aaPredicted RBP9.77□□□□□ -0.85
SDCBP-211ENST00000523441 HNRNPCL1O60812 293 aaKnown RBP9.77□□□□□ -0.85
SDCBP-211ENST00000523441 NGFP01138 241 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 PTHP01270 115 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 QDPRP09417 244 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 HNRNPCL4P0DMR1 293 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 THRBP10828 461 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 LBPP18428 481 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 MMP15P51511 669 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 CLRN1P58418 232 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 GNB2P62879 340 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 DPY19L1Q2PZI1 675 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 PABPC1L2AQ5JQF8 200 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 ZNF362Q5T0B9 420 aaPredicted RBP9.77□□□□□ -0.85
SDCBP-211ENST00000523441 LRFN4Q6PJG9 635 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 BTNL3Q6UXE8 466 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 SLC35D2Q76EJ3 337 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 COMTD1Q86VU5 262 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 OR2Z1Q8NG97 314 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 AKR7LQ8NHP1 331 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 TMEM54Q969K7 222 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 ZNF566Q969W8 418 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 ZBTB18Q99592 522 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 EPYCQ99645 322 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 ARHGDIGQ99819 225 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 CCNB1IP1Q9NPC3 277 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 TMEM106BQ9NUM4 274 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 ASH2LQ9UBL3 628 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 EIF3KQ9UBQ5 218 aaKnown RBP9.77□□□□□ -0.85
SDCBP-211ENST00000523441 IFT52Q9Y366 437 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 DOCK11Q5JSL3 2073 aa9.77□□□□□ -0.85
SDCBP-211ENST00000523441 TET2Q6N021 2002 aaPredicted RBP9.77□□□□□ -0.85
SDCBP-211ENST00000523441 KPNA4O00629 521 aaPredicted RBP9.76□□□□□ -0.85
SDCBP-211ENST00000523441 SNAP29O95721 258 aa9.76□□□□□ -0.85
SDCBP-211ENST00000523441 BPGMP07738 259 aa9.76□□□□□ -0.85
SDCBP-211ENST00000523441 ALDOCP09972 364 aaKnown RBP9.76□□□□□ -0.85
SDCBP-211ENST00000523441 MYZAPP0CAP1 466 aa9.76□□□□□ -0.85
SDCBP-211ENST00000523441 RPS2P15880 293 aaKnown RBP9.76□□□□□ -0.85
SDCBP-211ENST00000523441 STOMP27105 288 aa9.76□□□□□ -0.85
SDCBP-211ENST00000523441 CDAP32320 146 aa9.76□□□□□ -0.85
SDCBP-211ENST00000523441 WNT5AP41221 380 aa9.76□□□□□ -0.85
SDCBP-211ENST00000523441 BTG1P62324 171 aa9.76□□□□□ -0.85
SDCBP-211ENST00000523441 PAX8Q06710 450 aa9.76□□□□□ -0.85
SDCBP-211ENST00000523441 HLXQ14774 488 aaPredicted RBP9.76□□□□□ -0.85
SDCBP-211ENST00000523441 Q6ZPA2 131 aa9.76□□□□□ -0.85
SDCBP-211ENST00000523441 RFPL4BQ6ZWI9 263 aa9.76□□□□□ -0.85
SDCBP-211ENST00000523441 PXKQ7Z7A4 578 aa9.76□□□□□ -0.85
SDCBP-211ENST00000523441 NUDCD3Q8IVD9 361 aa9.76□□□□□ -0.85
SDCBP-211ENST00000523441 CNPY4Q8N129 248 aa9.76□□□□□ -0.85
SDCBP-211ENST00000523441 ADPRHL1Q8NDY3 354 aa9.76□□□□□ -0.85
SDCBP-211ENST00000523441 KLF14Q8TD94 323 aaPredicted RBP9.76□□□□□ -0.85
SDCBP-211ENST00000523441 ANP32BQ92688 251 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms