RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 FAM89BQ8N5H3 189 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 C11orf42Q8N5U0 333 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 HORMAD2Q8N7B1 307 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 STPG3Q8N7X2 389 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC35G3Q8N808 338 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ARL14EPQ8N8R7 260 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 EXD3Q8N9H8 876 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 RELL2Q8NC24 303 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 HJURPQ8NCD3 748 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 CHST14Q8NCH0 376 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 BHLHE23Q8NDY6 225 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 PLPP5Q8NEB5 264 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 LFNGQ8NES3 379 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR2AK2Q8NG84 335 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR4F15Q8NGB8 312 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR56A1Q8NGH5 318 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR5M8Q8NGP6 311 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR51F2Q8NH61 342 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 RNASE8Q8TDE3 154 aaKnown RBP4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 THEM6Q8WUY1 208 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 SMIM4Q8WVI0 70 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 TNFAIP8L1Q8WVP5 186 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 FCAMRQ8WWV6 532 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 SORCS1Q8WY21 1168 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZCCHC14Q8WYQ9 949 aaKnown RBP4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 C11orf40Q8WZ69 217 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 SMPDL3AQ92484 453 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 VOPP1Q96AW1 172 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 P2RY11Q96G91 374 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ACY3Q96HD9 319 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM176AQ96HP8 235 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 SAMD8Q96LT4 415 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ALKBH3Q96Q83 286 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR52E6Q96RD3 313 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 PRRX2Q99811 253 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 MICU1Q9BPX6 476 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 LRFN3Q9BTN0 628 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 FSD1LQ9BXM9 530 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ULBP1Q9BZM6 244 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF350Q9GZX5 532 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 CPVLQ9H3G5 476 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 DPEP2Q9H4A9 486 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 PLEKHA2Q9HB19 425 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 POPDC3Q9HBV1 291 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 LPAR2Q9HBW0 351 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ADGRL4Q9HBW9 690 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 APOBEC3GQ9HC16 384 aaKnown RBP4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 FGF20Q9NP95 211 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 MID1IP1Q9NPA3 183 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 PLSCR4Q9NRQ2 329 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 SPANXA1Q9NS26 97 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 TDP1Q9NUW8 608 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM161AQ9NX61 479 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF226Q9NYT6 803 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 LPAR3Q9UBY5 353 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 FTSJ1Q9UET6 329 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 CACFD1Q9UGQ2 172 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 STEAP1Q9UHE8 339 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 PPP1R3CQ9UQK1 317 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 RBM7Q9Y580 266 aaKnown RBP4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 DNAJC15Q9Y5T4 150 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 PRSS21Q9Y6M0 314 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 DOCK1Q14185 1865 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 KIAA1551Q9HCM1 1747 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZCWPW2A0A1B0GU75 182 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 ANKRD20A5PA0PJZ0 165 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 A6NLC8 198 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZAR1LA6NP61 321 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF705GA8MUZ8 300 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 IDSB3KWA1 339 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 F8VVB4 439 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 F8VWA3 439 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 GABARAPH6UMI1 98 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 YY2O15391 372 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC25A12O75746 678 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 RHBDL1O75783 438 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 NDUFB6O95139 128 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 PMS2P2O95744 297 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF682O95780 498 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 ONECUT2O95948 504 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 TOMM40O96008 361 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 VIPP01282 170 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLPIP03973 132 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 CD74P04233 296 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 CLEC3BP05452 202 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 IL6RP08887 468 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR10J4P0C629 311 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 STAG3L2P0CL84 134 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 GIMD1P0DJR0 217 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMIGD3P0DMS9 266 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 GZMBP10144 247 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 VEGFAP15692 232 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 PHKG2P15735 406 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 FDXRP22570 491 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 KDELR2P33947 212 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 SOX3P41225 446 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 AKR1C3P42330 323 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 NDUFV1P49821 464 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 CDKN1CP49918 316 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 SULT1A1P50225 295 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms