RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 ZNF417Q8TAU3 575 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 ASB13Q8WXK3 278 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 SGK3Q96BR1 496 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 A0A1B0GV50 99 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 C2orf72A6NCS6 295 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 KDM4EB2RXH2 506 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-213ENST00000514442 SULT1A3P0DMM9 295 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 SULT1A4P0DMN0 295 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 OR10A3P58181 314 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 DCDP81605 110 aaKnown RBP12.06□□□□□ -0.48
TCOF1-213ENST00000514442 NDUFAF7Q7L592 441 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 ZNF683Q8IZ20 524 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 CLEC1AQ8NC01 280 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 YIPF5Q969M3 257 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 SLC25A44Q96H78 314 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-213ENST00000514442 ZNF223Q9UK11 482 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-213ENST00000514442 PCDHGA9Q9Y5G4 932 aaKnown RBP12.06□□□□□ -0.48
TCOF1-213ENST00000514442 PPP1R2P9O14990 202 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 HCRTR1O43613 425 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 PTP4A3O75365 173 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 ERCC1P07992 297 aaPredicted RBP12.05□□□□□ -0.48
TCOF1-213ENST00000514442 SLC35E2P0CK97 266 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 CLDN12P56749 244 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 TCTN1Q2MV58 587 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 B3GNTL1Q67FW5 361 aaPredicted RBP12.05□□□□□ -0.48
TCOF1-213ENST00000514442 C12orf73Q69YU5 71 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 URM1Q9BTM9 101 aaKnown RBP12.05□□□□□ -0.48
TCOF1-213ENST00000514442 TMEM231Q9H6L2 316 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 MFSD2BA6NFX1 497 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 LCATP04180 440 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 CEACAM5P06731 702 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 SELENOPP49908 381 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 RAB4BP61018 213 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 HTRA4P83105 476 aaPredicted RBP12.05□□□□□ -0.48
TCOF1-213ENST00000514442 TMEM215Q68D42 235 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 ZSCAN4Q8NAM6 433 aaPredicted RBP12.05□□□□□ -0.48
TCOF1-213ENST00000514442 TOLLIPQ9H0E2 274 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 ENKD1Q9H0I2 346 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 OR51B6Q9H340 312 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 UTS2O95399 124 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 RPS2P15880 293 aaKnown RBP12.05□□□□□ -0.48
TCOF1-213ENST00000514442 ENPP1P22413 925 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 RFC3P40938 356 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 MECP2P51608 486 aaKnown RBP12.05□□□□□ -0.48
TCOF1-213ENST00000514442 SFRP5Q5T4F7 317 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 ZNF836Q6ZNA1 936 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 ACOT7LQ6ZUV0 252 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 BORCS8Q96FH0 119 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 SEMA4CQ9C0C4 833 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 AUNIPQ9H7T9 357 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 SERGEFQ9UGK8 458 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 A0A1B0GWA3 101 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 A6NIZ1 184 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 MCRIP1C9JLW8 97 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 SYT5O00445 386 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 GPRIN2O60269 458 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 ST6GAL1P15907 406 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 POU3F2P20265 443 aaPredicted RBP12.05□□□□□ -0.48
TCOF1-213ENST00000514442 RAP1BP61224 184 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 RAP1AP62834 184 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 MALLQ13021 153 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 SMAD4Q13485 552 aaKnown RBP12.05□□□□□ -0.48
TCOF1-213ENST00000514442 OR2AK2Q8NG84 335 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 SGPP1Q9BX95 441 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 TMPRSS5Q9H3S3 457 aa12.05□□□□□ -0.48
TCOF1-213ENST00000514442 SUSD5O60279 629 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 IL5P05113 134 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 HOXB1P14653 301 aaPredicted RBP12.04□□□□□ -0.48
TCOF1-213ENST00000514442 AMY2BP19961 511 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 DCAF7P61962 342 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 DUSP5Q16690 384 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 OVCH1Q7RTY7 1134 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 GDF7Q7Z4P5 450 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 SMIM4Q8WVI0 70 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 FAM46BQ96A09 425 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 SDHCQ99643 169 aaPredicted RBP12.04□□□□□ -0.48
TCOF1-213ENST00000514442 ZNF160Q9HCG1 818 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 PURGQ9UJV8 347 aaKnown RBP12.04□□□□□ -0.48
TCOF1-213ENST00000514442 ACAD8Q9UKU7 415 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 DAPP1Q9UN19 280 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 TMEM72A0PK05 275 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 VSTM5A8MXK1 200 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 HRO43593 1189 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 CTNSO60931 367 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 RAD51DO75771 328 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 SBK2P0C263 348 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 TMEM225BP0DP42 221 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 SRFP11831 508 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 CD79AP11912 226 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 CD1CP29017 333 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 UBE2NP61088 152 aaKnown RBP12.04□□□□□ -0.48
TCOF1-213ENST00000514442 HIST2H3AQ71DI3 136 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 LCORQ96JN0 433 aaPredicted RBP12.04□□□□□ -0.48
TCOF1-213ENST00000514442 CNTNAP3Q9BZ76 1288 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 POFUT1Q9H488 388 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 MIOXQ9UGB7 285 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 WIF1Q9Y5W5 379 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 BCL2L11O43521 198 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 SLC34A2O95436 690 aa12.04□□□□□ -0.48
TCOF1-213ENST00000514442 NQO2P16083 231 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms