RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 DMWDQ09019 674 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 PRAMEF17Q5VTA0 474 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 FAAP20Q6NZ36 180 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 SLC35D2Q76EJ3 337 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 ZNF679Q8IYX0 411 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 CARFQ8N187 725 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 ANGPTL6Q8NI99 470 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 SEC22CQ9BRL7 303 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 PTDSS2Q9BVG9 487 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 DPCDQ9BVM2 203 aaPredicted RBP16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 NPDC1Q9NQX5 325 aaPredicted RBP16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 ZNF69Q9UC07 566 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 TMED7Q9Y3B3 224 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 C17orf51A8MQB3 221 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 A8MVM7 634 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 H0YC42 278 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 CREBL2O60519 120 aaPredicted RBP16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 SLC16A7O60669 478 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 NDUFB6O95139 128 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 IFNA7P01567 189 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 IFNGR1P15260 489 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 ABCD3P28288 659 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 SNTA1Q13424 505 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 ARHGAP40Q5TG30 622 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 ANKRD16Q6P6B7 361 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 KCTD18Q6PI47 426 aaPredicted RBP16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 SEZ6L2Q6UXD5 910 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 DNM1P46Q6ZS02 220 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 SPICQ8N5J4 248 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 OR1N1Q8NGS0 311 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 TXNIPQ9H3M7 391 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 TAS2R8Q9NYW2 309 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 MGAT4CQ9UBM8 478 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 GTF2A1LQ9UNN4 478 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 LEUTXA8MZ59 168 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 TOXO94900 526 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 SPARCP09486 303 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 SSTR2P30874 369 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 C1orf140Q5VVS0 124 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 KRT77Q7Z794 578 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 PLXDC1Q8IUK5 500 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 FTMTQ8N4E7 242 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 OR51D1Q8NGF3 324 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 ZNF519Q8TB69 540 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 RNF128Q8TEB7 428 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 FOXN4Q96NZ1 517 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 UTP23Q9BRU9 249 aaKnown RBP16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 CHIAQ9BZP6 476 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 OR6C76A6NM76 312 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 H7C417 338 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 DXOO77932 396 aaKnown RBP16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 IL5P05113 134 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 SRFP11831 508 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 PCGF3Q3KNV8 242 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 MAMSTRQ6ZN01 415 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 DPYSL5Q9BPU6 564 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 VSX1Q9NZR4 365 aaPredicted RBP16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 MTFP1Q9UDX5 166 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 MKL2Q9ULH7 1088 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 PCDH15Q96QU1 1955 aa16.18■□□□□ 0.18
CCHCR1-228ENST00000509552 LINC00862A6NCI5 91 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 GGT3PA6NGU5 568 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 SNRPGP15A8MWD9 76 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 ALDOBP05062 364 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 CSF1P09603 554 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 ANXA7P20073 488 aaKnown RBP16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 CSRP1P21291 193 aaKnown RBP16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 CFPP27918 469 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 EFNA3P52797 238 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 TSPAN5P62079 268 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 ADAM8P78325 824 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 PLA2G7Q13093 441 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 RAB11BQ15907 218 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 GRINAQ7Z429 371 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 CADM4Q8NFZ8 388 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 ATOH1Q92858 354 aaPredicted RBP16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 PCDHGA5Q9Y5G8 931 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 IGHV1OR21-1A0A087WYE8 117 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 DUX1O43812 170 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 NPIPB7O75200 414 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 CTAG2O75638 210 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 AHSA1O95433 338 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 C4BPBP20851 252 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 POU3F4P49335 361 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 MECP2P51608 486 aaKnown RBP16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 NXPH1P58417 271 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 PSMA6P60900 246 aaKnown RBP16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 INSM1Q01101 510 aaPredicted RBP16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 RIPPLY1Q0D2K3 151 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 TEX30Q5JUR7 227 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 C1orf189Q5VU69 101 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 ADGRG3Q86Y34 549 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 DHDHQ9UQ10 334 aa16.17■□□□□ 0.18
CCHCR1-228ENST00000509552 IGLV1-36A0A0B4J1U3 117 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 OR2T1O43869 369 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 GIPP09681 153 aaPredicted RBP16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 RIDAP52758 137 aaKnown RBP16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 ROM1Q03395 351 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 IKZF1Q13422 519 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms