RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 CDH12P55289 794 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 BAMBIQ13145 260 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 MOGQ16653 247 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 TUSC1Q2TAM9 212 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 SLC36A2Q495M3 483 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 FAM209AQ5JX71 171 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 SPATA46Q5T0L3 261 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 LRFN4Q6PJG9 635 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 SLC2A7Q6PXP3 512 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 KRT73Q86Y46 540 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 BCL6BQ8N143 479 aaPredicted RBP13.55□□□□□ -0.24
CXCL1-202ENST00000509101 RBM15BQ8NDT2 890 aaKnown RBP13.55□□□□□ -0.24
CXCL1-202ENST00000509101 DEFB108BQ8NET1 73 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 OR1J2Q8NGS2 313 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 GTF2H4Q92759 462 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 TAF15Q92804 592 aaKnown RBP eCLIP13.55□□□□□ -0.24
CXCL1-202ENST00000509101 POP5Q969H6 163 aaKnown RBP13.55□□□□□ -0.24
CXCL1-202ENST00000509101 ZNF566Q969W8 418 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 PAIP2Q9BPZ3 127 aaKnown RBP13.55□□□□□ -0.24
CXCL1-202ENST00000509101 WFDC6Q9BQY6 131 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 SPATA5L1Q9BVQ7 753 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 SSU72Q9NP77 194 aaKnown RBP13.55□□□□□ -0.24
CXCL1-202ENST00000509101 LEF1Q9UJU2 399 aaPredicted RBP13.55□□□□□ -0.24
CXCL1-202ENST00000509101 NUP50Q9UKX7 468 aa13.55□□□□□ -0.24
CXCL1-202ENST00000509101 TPST2O60704 377 aa13.54□□□□□ -0.24
CXCL1-202ENST00000509101 MT-ATP6P00846 226 aa13.54□□□□□ -0.24
CXCL1-202ENST00000509101 PTHP01270 115 aa13.54□□□□□ -0.24
CXCL1-202ENST00000509101 PGA4P0DJD7 388 aa13.54□□□□□ -0.24
CXCL1-202ENST00000509101 PGA3P0DJD8 388 aa13.54□□□□□ -0.24
CXCL1-202ENST00000509101 HOXB9P17482 250 aaPredicted RBP13.54□□□□□ -0.24
CXCL1-202ENST00000509101 CCNOP22674 350 aa13.54□□□□□ -0.24
CXCL1-202ENST00000509101 ATP4BP51164 291 aa13.54□□□□□ -0.24
CXCL1-202ENST00000509101 IL13RA1P78552 427 aa13.54□□□□□ -0.24
CXCL1-202ENST00000509101 PLP2Q04941 152 aa13.54□□□□□ -0.24
CXCL1-202ENST00000509101 TMEM255AQ5JRV8 349 aa13.54□□□□□ -0.24
CXCL1-202ENST00000509101 GCNT6Q5T4J0 391 aa13.54□□□□□ -0.24
CXCL1-202ENST00000509101 DPPA2Q7Z7J5 298 aa13.54□□□□□ -0.24
CXCL1-202ENST00000509101 RANBP3LQ86VV4 465 aaPredicted RBP13.54□□□□□ -0.24
CXCL1-202ENST00000509101 C10orf111Q8N326 155 aa13.54□□□□□ -0.24
CXCL1-202ENST00000509101 IPCEF1Q8WWN9 437 aaPredicted RBP13.54□□□□□ -0.24
CXCL1-202ENST00000509101 SLC25A44Q96H78 314 aaPredicted RBP13.54□□□□□ -0.24
CXCL1-202ENST00000509101 ZNF48Q96MX3 618 aaPredicted RBP13.54□□□□□ -0.24
CXCL1-202ENST00000509101 GPA33Q99795 319 aa13.54□□□□□ -0.24
CXCL1-202ENST00000509101 LRMDAQ9H2I8 198 aa13.54□□□□□ -0.24
CXCL1-202ENST00000509101 KCNK9Q9NPC2 374 aa13.54□□□□□ -0.24
CXCL1-202ENST00000509101 MMP26Q9NRE1 261 aa13.54□□□□□ -0.24
CXCL1-202ENST00000509101 SDR39U1Q9NRG7 319 aaPredicted RBP13.54□□□□□ -0.24
CXCL1-202ENST00000509101 PURGQ9UJV8 347 aaKnown RBP13.54□□□□□ -0.24
CXCL1-202ENST00000509101 SLC13A4Q9UKG4 626 aa13.54□□□□□ -0.24
CXCL1-202ENST00000509101 A0A0G2JK05 382 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 ZSCAN5BA6NJL1 495 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 RNF13O43567 381 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 ERLIN1O75477 346 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 FOXH1O75593 365 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 UBOX5O94941 541 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 RNASE1P07998 156 aaKnown RBP13.53□□□□□ -0.24
CXCL1-202ENST00000509101 QDPRP09417 244 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 APLNRP35414 380 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 MPV17P39210 176 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 MMP15P51511 669 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 CDK6Q00534 326 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 HSF2Q03933 536 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 SLC3A1Q07837 685 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 KLF17Q5JT82 389 aaPredicted RBP13.53□□□□□ -0.24
CXCL1-202ENST00000509101 SWT1Q5T5J6 900 aaKnown RBP13.53□□□□□ -0.24
CXCL1-202ENST00000509101 REEP3Q6NUK4 255 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 LRRC18Q8N456 261 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 GOLGA6L1Q8N7Z2 621 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 GEMIN6Q8WXD5 167 aaKnown RBP13.53□□□□□ -0.24
CXCL1-202ENST00000509101 MAELQ96JY0 434 aaKnown RBP13.53□□□□□ -0.24
CXCL1-202ENST00000509101 DCAF16Q9NXF7 216 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 PLEK2Q9NYT0 353 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 TRIM33Q9UPN9 1127 aa13.53□□□□□ -0.24
CXCL1-202ENST00000509101 PPIAL4EA0A075B759 164 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 PPIAL4CA0A0B4J2A2 164 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 PLSCR5A0PG75 271 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 PPIAL4DF5H284 164 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 M0R3H8 397 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 PPIAL4FP0DN26 164 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 AQP1P29972 269 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 GCH1P30793 250 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 CLRN1P58418 232 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 ZNF718Q3SXZ3 478 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 SPRNQ5BIV9 151 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 ZNF101Q8IZC7 436 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 ANKRD42Q8N9B4 389 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 CPEB3Q8NE35 698 aaKnown RBP13.52□□□□□ -0.25
CXCL1-202ENST00000509101 SLC25A28Q96A46 364 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 ZNF347Q96SE7 839 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 EGLN1Q9GZT9 426 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 NPHS2Q9NP85 383 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 TAS2R5Q9NYW4 299 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 SLC25A37Q9NYZ2 338 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 AUP1Q9Y679 476 aa13.52□□□□□ -0.25
CXCL1-202ENST00000509101 PRORSD1PA6NEY8 169 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 POM121CA8CG34 1229 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 KPNA4O00629 521 aaPredicted RBP13.51□□□□□ -0.25
CXCL1-202ENST00000509101 UBDO15205 165 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 CH25HO95992 272 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 IGHV2-70P01814 119 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms