RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 LMX1AQ8TE12 382 aa5.26□□□□□ -1.57
SCLT1-207ENST00000506233 SSC4DQ8WTU2 575 aa5.26□□□□□ -1.57
SCLT1-207ENST00000506233 C8orf44Q96CB5 159 aa5.26□□□□□ -1.57
SCLT1-207ENST00000506233 PGAM5Q96HS1 289 aa5.26□□□□□ -1.57
SCLT1-207ENST00000506233 TGM7Q96PF1 710 aa5.26□□□□□ -1.57
SCLT1-207ENST00000506233 TSPAN32Q96QS1 320 aa5.26□□□□□ -1.57
SCLT1-207ENST00000506233 GPHA2Q96T91 129 aa5.26□□□□□ -1.57
SCLT1-207ENST00000506233 TEAD3Q99594 435 aa5.26□□□□□ -1.57
SCLT1-207ENST00000506233 OR52D1Q9H346 318 aa5.26□□□□□ -1.57
SCLT1-207ENST00000506233 MRPL22Q9NWU5 206 aaKnown RBP5.26□□□□□ -1.57
SCLT1-207ENST00000506233 PHF11Q9UIL8 331 aa5.26□□□□□ -1.57
SCLT1-207ENST00000506233 ERVK-19Q9WJR5 959 aa5.26□□□□□ -1.57
SCLT1-207ENST00000506233 NCKAP1Q9Y2A7 1128 aa5.26□□□□□ -1.57
SCLT1-207ENST00000506233 A3GALT2U3KPV4 340 aa5.26□□□□□ -1.57
SCLT1-207ENST00000506233 C5orf63A6NC05 138 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 OR5K4A6NMS3 321 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 NCR1O76036 304 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 SERPIND1P05546 499 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 SLC35G6P0C7Q6 338 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 ZNF17P17021 662 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 SHC1P29353 583 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 PSMD7P51665 324 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 LOXL3P58215 753 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 TGM3Q08188 693 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 HIST3H3Q16695 136 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 TMEM255AQ5JRV8 349 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 TMEM211Q6ICI0 200 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 FAM198BQ6UWH4 519 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 RRM2BQ7LG56 351 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 ZNF367Q7RTV3 350 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 TAF8Q7Z7C8 310 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 ADGRG3Q86Y34 549 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 WDSUB1Q8N9V3 476 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 OR10S1Q8NGN2 331 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 OR13C5Q8NGS8 318 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 OR4C6Q8NH72 309 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 GNPDA2Q8TDQ7 276 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 GRHL3Q8TE85 626 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 TMEM239Q8WW34 195 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 ATOH1Q92858 354 aaPredicted RBP5.25□□□□□ -1.57
SCLT1-207ENST00000506233 MED18Q9BUE0 208 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 ABHD6Q9BV23 337 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 SRRQ9GZT4 340 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 ADNPQ9H2P0 1102 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 ARMC7Q9H6L4 198 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 SAP30LQ9HAJ7 183 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 NGBQ9NPG2 151 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 POLE4Q9NR33 117 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 NLKQ9UBE8 527 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 EXTL2Q9UBQ6 330 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 ING1Q9UK53 422 aaPredicted RBP5.25□□□□□ -1.57
SCLT1-207ENST00000506233 STRAPQ9Y3F4 350 aaKnown RBP5.25□□□□□ -1.57
SCLT1-207ENST00000506233 A0A1W2PQL4 384 aaPredicted RBP5.25□□□□□ -1.57
SCLT1-207ENST00000506233 FRG2CA6NGY1 282 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 GPRIN2O60269 458 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 STX11O75558 287 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 WISP2O76076 250 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 IGHMP01871 453 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 ITGA2P17301 1181 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 NUDT1P36639 197 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 CDC20Q12834 499 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 NNATQ16517 81 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 ZNF74Q16587 644 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 MEDAGQ5VYS4 303 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 FAM166AQ6J272 317 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 ANKRD37Q7Z713 158 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 CARFQ8N187 725 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 CENPSQ8N2Z9 138 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 ZNF555Q8NEP9 628 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 OR4D9Q8NGE8 314 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 OR52M1Q8NGK5 317 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 OR8J1Q8NGP2 316 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 ZNF671Q8TAW3 534 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 ELP5Q8TE02 316 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 MCHR1Q99705 422 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 WWTR1Q9GZV5 400 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 ZNF221Q9UK13 617 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 UGT2A1Q9Y4X1 527 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 CHCHD2Q9Y6H1 151 aaPredicted RBP5.25□□□□□ -1.57
SCLT1-207ENST00000506233 CDH10Q9Y6N8 788 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 IGHV3-20A0A0C4DH32 117 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 TEX51A0A1B0GUA7 166 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 ANXA2P2A6NMY6 339 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 SLC33A1O00400 549 aaPredicted RBP5.25□□□□□ -1.57
SCLT1-207ENST00000506233 OGG1O15527 345 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 PLPP2O43688 288 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 ZFPL1O95159 310 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 PAHP00439 452 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 CLDN6P56747 220 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 B3GALT5-AS1P59052 145 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 IFITM2Q01629 132 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 ILF3Q12906 894 aaKnown RBP eCLIP5.25□□□□□ -1.57
SCLT1-207ENST00000506233 SLC36A2Q495M3 483 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 Q5BKY6 102 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 SLC25A53Q5H9E4 307 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 RHBDD2Q6NTF9 364 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 TMEM182Q6ZP80 229 aaPredicted RBP5.25□□□□□ -1.57
SCLT1-207ENST00000506233 P2RY8Q86VZ1 359 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 RIT1Q92963 219 aa5.25□□□□□ -1.57
SCLT1-207ENST00000506233 EFHD2Q96C19 240 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms