RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 VAMP5O95183 116 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 HLA-HP01893 362 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 PATE4P0C8F1 98 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 NQO1P15559 274 aaKnown RBP4.19□□□□□ -1.74
CDH9-203ENST00000505045 ZNF43P17038 809 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 FUT1P19526 365 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 IL1RL1Q01638 556 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 NAAAQ02083 359 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 TGFBR3Q03167 851 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 RUNX1T1Q06455 604 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 PUDPQ08623 228 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 NPRL3Q12980 569 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 CAMK2DQ13557 499 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 ETFDHQ16134 617 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 ZNF74Q16587 644 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 ZSWIM7Q19AV6 140 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 AGAP6Q5VW22 663 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 FAM91A1Q658Y4 838 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 NANOGP8Q6NSW7 305 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 KLHL17Q6TDP4 642 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 H1FNTQ75WM6 255 aaPredicted RBP4.19□□□□□ -1.74
CDH9-203ENST00000505045 SLC46A3Q7Z3Q1 461 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 SNX32Q86XE0 403 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 CALHM3Q86XJ0 350 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 MEX3DQ86XN8 651 aaKnown RBP4.19□□□□□ -1.74
CDH9-203ENST00000505045 KRT73Q86Y46 540 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 ZNF584Q8IVC4 421 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 ADPRHL1Q8NDY3 354 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 OR10H5Q8NGA6 315 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 PFN4Q8NHR9 129 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 FGFBP3Q8TAT2 258 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 DNAJA4Q8WW22 397 aaPredicted RBP4.19□□□□□ -1.74
CDH9-203ENST00000505045 FBXO17Q96EF6 278 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 TRMT61AQ96FX7 289 aaKnown RBP4.19□□□□□ -1.74
CDH9-203ENST00000505045 ZNF75AQ96N20 296 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 OXGR1Q96P68 337 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 SOX7Q9BT81 388 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 LINC00470Q9BZP3 86 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 ARMC7Q9H6L4 198 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 NANOGQ9H9S0 305 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 CACYBPQ9HB71 228 aaKnown RBP4.19□□□□□ -1.74
CDH9-203ENST00000505045 SAR1AQ9NR31 198 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 CA10Q9NS85 328 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 C20orf141Q9NUB4 165 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 FAIMQ9NVQ4 179 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 TMEM45AQ9NWC5 275 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 ARMCX1Q9P291 453 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 CRNNQ9UBG3 495 aaPredicted RBP4.19□□□□□ -1.74
CDH9-203ENST00000505045 RPS6KB2Q9UBS0 482 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 SLC7A7Q9UM01 511 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 CORO2BQ9UQ03 480 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 NBEAL1Q6ZS30 2694 aa4.19□□□□□ -1.74
CDH9-203ENST00000505045 IGHV2OR16-5A0A0B4J2B6 119 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 PRORSD1PA6NEY8 169 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 FAM171A2A8MVW0 826 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 ZNF99A8MXY4 864 aaPredicted RBP4.18□□□□□ -1.74
CDH9-203ENST00000505045 PLPP3O14495 311 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 MRASO14807 208 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 OR2T1O43869 369 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 PIP5K1CO60331 668 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 SLC43A1O75387 559 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 SERPINB7O75635 380 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 CH25HO95992 272 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 AHCYP23526 432 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 OR1E2P47887 323 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 MNAT1P51948 309 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 UGT2B15P54855 530 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 UBE2NP61088 152 aaKnown RBP4.18□□□□□ -1.74
CDH9-203ENST00000505045 KLF10Q13118 480 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 HNRNPA0Q13151 305 aaKnown RBP4.18□□□□□ -1.74
CDH9-203ENST00000505045 C1DQ13901 141 aaKnown RBP4.18□□□□□ -1.74
CDH9-203ENST00000505045 MFSD13AQ14CX5 517 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 TMEM249Q2WGJ8 235 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 ZMAT1Q5H9K5 638 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 C6orf52Q5T4I8 152 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 KRT80Q6KB66 452 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 HMBOX1Q6NT76 420 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 ZNF544Q6NX49 715 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 ANKRD16Q6P6B7 361 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 RANBP3LQ86VV4 465 aaPredicted RBP4.18□□□□□ -1.74
CDH9-203ENST00000505045 NKAIN4Q8IVV8 208 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 UEVLDQ8IX04 471 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 C20orf196Q8IYI0 205 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 CDK20Q8IZL9 346 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 FBXL14Q8N1E6 418 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 GPR137CQ8N3F9 429 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 PAQR4Q8N4S7 273 aaPredicted RBP4.18□□□□□ -1.74
CDH9-203ENST00000505045 SCAIQ8N9R8 606 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 RBM15BQ8NDT2 890 aaKnown RBP4.18□□□□□ -1.74
CDH9-203ENST00000505045 C10orf105Q8TEF2 133 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 TMEM255BQ8WV15 326 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 C10orf82Q8WW14 230 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 LRRC58Q96CX6 371 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 SLC47A1Q96FL8 570 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 LRRC37BQ96QE4 947 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 ZNF607Q96SK3 696 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 TMEM43Q9BTV4 400 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 KATNB1Q9BVA0 655 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 SPATA5L1Q9BVQ7 753 aa4.18□□□□□ -1.74
CDH9-203ENST00000505045 PCDHAC1Q9H158 963 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms