RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 H7C417 338 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 ZNF208O43345 1280 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 CCL5P13501 91 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 MYOGP15173 224 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 SPI1P17947 270 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 PRKAR1BP31321 381 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 SLC6A6P31641 620 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 PPM1AP35813 382 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 FRKP42685 505 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-208ENST00000504387 F2RL1P55085 397 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 RPS27AP62979 156 aaKnown RBP6.93□□□□□ -1.3
NEDD9-208ENST00000504387 UBA52P62987 128 aaKnown RBP6.93□□□□□ -1.3
NEDD9-208ENST00000504387 IL13RA1P78552 427 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 PRDX1Q06830 199 aaKnown RBP6.93□□□□□ -1.3
NEDD9-208ENST00000504387 IKZF1Q13422 519 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 FAM53BQ14153 422 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 EIF2S3LQ2VIR3 472 aaKnown RBP6.93□□□□□ -1.3
NEDD9-208ENST00000504387 MOGAT2Q3SYC2 334 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 KLHL26Q53HC5 615 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 ELFN2Q5R3F8 820 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 CYB5R2Q6BCY4 276 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 C11orf87Q6NUJ2 197 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 CDPF1Q6NVV7 123 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 ZNF585AQ6P3V2 769 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 BAIAP2L2Q6UXY1 529 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 ERN2Q76MJ5 926 aaKnown RBP6.93□□□□□ -1.3
NEDD9-208ENST00000504387 FAM220AQ7Z4H9 259 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 GABRG1Q8N1C3 465 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 NR4A3Q92570 626 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 SMARCD2Q92925 531 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 LCORQ96JN0 433 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-208ENST00000504387 ALG12Q9BV10 488 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 ZFP57Q9NU63 452 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 MTFP1Q9UDX5 166 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 GPN3Q9UHW5 284 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-208ENST00000504387 PCOLCE2Q9UKZ9 415 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 CSAG2Q9Y5P2 127 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 HEATR5AQ86XA9 2040 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 RNF222A6NCQ9 220 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 OR6C65A6NJZ3 312 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 MPTX1A8MV57 137 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 OGG1O15527 345 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 CTAG2O75638 210 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 OLFM2O95897 454 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 ADH1CP00326 375 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 IL5P05113 134 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 OR2T7P0C7T2 308 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 PVRP15151 417 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 NME1P15531 152 aaKnown RBP6.93□□□□□ -1.3
NEDD9-208ENST00000504387 CASRP41180 1078 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 S100A10P60903 97 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 REEP5Q00765 189 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 SKP2Q13309 424 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 PPP1R1AQ13522 171 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 ERV3-1Q14264 604 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 MLF2Q15773 248 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-208ENST00000504387 NKAIN2Q5VXU1 208 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 NUDT18Q6ZVK8 323 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 MOB3CQ70IA8 216 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 GJD3Q8N144 294 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 OR2T27Q8NH04 317 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 STOML3Q8TAV4 291 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 LCN9Q8WX39 176 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 JSRP1Q96MG2 331 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-208ENST00000504387 SPACA5Q96QH8 159 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 AMELYQ99218 206 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 PFDN5Q99471 154 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 TMPRSS13Q9BYE2 586 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 SLC27A6Q9Y2P4 619 aa6.93□□□□□ -1.3
NEDD9-208ENST00000504387 SPTBN5Q9NRC6 3674 aaKnown RBP6.92□□□□□ -1.3
NEDD9-208ENST00000504387 C17orf51A8MQB3 221 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 C1orf196B1AJZ1 125 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 ADAP1O75689 374 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 CYB5AP00167 134 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 RPA2P15927 270 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 RCC1P18754 421 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-208ENST00000504387 RAB6AP20340 208 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 GALP22466 123 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 SLC2A5P22732 501 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 P2RY2P41231 377 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 CDKN2AP42771 156 aaKnown RBP6.92□□□□□ -1.3
NEDD9-208ENST00000504387 ACTC1P68032 377 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 ACTA1P68133 377 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 DHODHQ02127 395 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 GLYATL3Q5SZD4 288 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 FAM122BQ7Z309 247 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 MARCH3Q86UD3 253 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 ZNF227Q86WZ6 799 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 YAF2Q8IY57 180 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 OR2L13Q8N349 312 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 LRRC25Q8N386 305 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-208ENST00000504387 ADAD2Q8NCV1 583 aaKnown RBP6.92□□□□□ -1.3
NEDD9-208ENST00000504387 OR4K14Q8NGD5 310 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 OR4A4PQ8NGN8 299 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 NUDCD2Q8WVJ2 157 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 MRPL48Q96GC5 212 aaKnown RBP6.92□□□□□ -1.3
NEDD9-208ENST00000504387 CST11Q9H112 138 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 RSPH9Q9H1X1 276 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-208ENST00000504387 PIGMQ9H3S5 423 aa6.92□□□□□ -1.3
NEDD9-208ENST00000504387 RXFP3Q9NSD7 469 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms