RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 ZNF771Q7L3S4 317 aaPredicted RBP3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PAGE2Q7Z2X7 111 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 HSD11B1LQ7Z5J1 315 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CSNK1A1LQ8N752 337 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 MAPKAPK5-AS1Q8N8E1 139 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SLC37A3Q8NCC5 494 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 OR4F17Q8NGA8 305 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 OR5L2Q8NGL0 311 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 OR4F5Q8NH21 305 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 OR52E5Q8NH55 327 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TCP10LQ8TDR4 215 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SECTM1Q8WVN6 248 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SMARCD2Q92925 531 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 STMN2Q93045 179 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PPP1R14BQ96C90 147 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZNF689Q96CS4 500 aaPredicted RBP3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CCDC126Q96EE4 140 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PAGE5Q96GU1 130 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CPB2Q96IY4 423 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 RNF170Q96K19 258 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 OR4F4Q96R69 305 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 NAT9Q9BTE0 207 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 MAP1LC3CQ9BXW4 147 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 POTEKPQ9BYX7 375 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SRRQ9GZT4 340 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SLC38A1Q9H2H9 487 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CENPHQ9H3R5 247 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 METTL8Q9H825 291 aaKnown RBP3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 NHEJ1Q9H9Q4 299 aaPredicted RBP3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ANKHQ9HCJ1 492 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 NRN1Q9NPD7 142 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 RGS18Q9NS28 235 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CUTCQ9NTM9 273 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SIGLEC8Q9NYZ4 499 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 STMN3Q9NZ72 180 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SENP1Q9P0U3 644 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 MRM2Q9UI43 246 aaKnown RBP3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 EXOSC1Q9Y3B2 195 aaKnown RBP3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 URGCP-MRPS24S4R325 110 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TRIP11Q15643 1979 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 XIRP2A4UGR9 3374 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 A0A087WZ39 114 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 A0A1B0GUA9 196 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TMEM213A2RRL7 107 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SMIM23A6NLE4 172 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PRAMEF26H0Y7S4 382 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 GOLGA6L19H0YKK7 550 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SLC16A4O15374 487 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 RGS16O15492 202 aaPredicted RBP3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 LINC01565O15544 149 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PPIHO43447 177 aaKnown RBP3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 XPNPEP2O43895 674 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 EFNA2O43921 213 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 RPP14O95059 124 aaKnown RBP3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 UMODP07911 640 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SP1P08047 785 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CT62P0C5K7 136 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 FAM157CP0CG43 387 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TRIM49P0CI25 452 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TRIM49CP0CI26 452 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PRSS56P0CW18 603 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 GATA1P15976 413 aaPredicted RBP3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZNF26P17031 533 aaPredicted RBP3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CNR1P21554 472 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 UGT2B10P36537 528 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CSKP41240 450 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 GPR1P46091 355 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 GDI2P50395 445 aaKnown RBP3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PEX3P56589 373 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 DCDC1P59894 354 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 RPL27P61353 136 aaKnown RBP3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PAX2Q02962 417 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 RIPPLY1Q0D2K3 151 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 EIF2B1Q14232 305 aaKnown RBP3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CASP8Q14790 479 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SLC5A12Q1EHB4 618 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 XKR6Q5GH73 641 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CLLU1OSQ5K130 101 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 DCAF10Q5QP82 559 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 LY6G6FQ5SQ64 297 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 GFI1BQ5VTD9 330 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PPP1R2P3Q6NXS1 205 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PRMT9Q6P2P2 845 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ATRAIDQ6UW56 229 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CYS1Q717R9 158 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 FAM122BQ7Z309 247 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZNF546Q86UE3 836 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CRLF3Q8IUI8 442 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 METTL4Q8N3J2 472 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 DNAJC22Q8N4W6 341 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 DEFB123Q8N688 67 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 C15orf54Q8N8G6 183 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZNF441Q8N8Z8 693 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TMEM161BQ8NDZ6 487 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PLPPR1Q8TBJ4 325 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ACOT11Q8WXI4 607 aaPredicted RBP3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ISOC2Q96AB3 205 aa3.6□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CCDC127Q96BQ5 260 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms