RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 MS4A7Q9GZW8 240 aaPredicted RBP11.79□□□□□ -0.52
CCDC58-207ENST00000498466 WDR55Q9H6Y2 383 aaPredicted RBP11.79□□□□□ -0.52
CCDC58-207ENST00000498466 ROPN1Q9HAT0 212 aaPredicted RBP11.79□□□□□ -0.52
CCDC58-207ENST00000498466 TESQ9UGI8 421 aaKnown RBP11.79□□□□□ -0.52
CCDC58-207ENST00000498466 HAO1Q9UJM8 370 aa11.79□□□□□ -0.52
CCDC58-207ENST00000498466 WNK2Q9Y3S1 2297 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 A0A0B4J2E0 115 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 A0A1B0GX12 115 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 TRAPPC2LH3BP13 241 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 CLDN34H7C241 214 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 TM9SF1O15321 606 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 IGHMP01871 453 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 QDPRP09417 244 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 SBK2P0C263 348 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 ETS2P15036 469 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 OMGP23515 440 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 EPHA3P29320 983 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 PCGF2P35227 344 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 MMP15P51511 669 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 HSF2Q03933 536 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 STX3Q13277 289 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 MELKQ14680 651 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 OR1Q1Q15612 314 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 OCLNQ16625 522 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 ZNF718Q3SXZ3 478 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 CEP85LQ5SZL2 805 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 SPATA46Q5T0L3 261 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 THEM4Q5T1C6 240 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 LRFN4Q6PJG9 635 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 SPATC1Q76KD6 591 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 GEMIN6Q8WXD5 167 aaKnown RBP11.78□□□□□ -0.52
CCDC58-207ENST00000498466 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCDC58-207ENST00000498466 TMIGD2Q96BF3 282 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 SLC25A44Q96H78 314 aaPredicted RBP11.78□□□□□ -0.52
CCDC58-207ENST00000498466 DCLRE1CQ96SD1 692 aaKnown RBP11.78□□□□□ -0.52
CCDC58-207ENST00000498466 RSPO3Q9BXY4 272 aaPredicted RBP11.78□□□□□ -0.52
CCDC58-207ENST00000498466 RAD21L1Q9H4I0 556 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 NPHS2Q9NP85 383 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 NPTNQ9Y639 398 aa11.78□□□□□ -0.52
CCDC58-207ENST00000498466 ZSCAN5BA6NJL1 495 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 CLIC1O00299 241 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 RNF13O43567 381 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 TPST1O60507 370 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 GPANK1O95872 356 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 MT-ATP6P00846 226 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 IDO1P14902 403 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 ZNF12P17014 697 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 MTNR1AP48039 350 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 CDH12P55289 794 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 RGS8P57771 180 aaPredicted RBP11.77□□□□□ -0.53
CCDC58-207ENST00000498466 FADDQ13158 208 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 NXNQ6DKJ4 435 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 DHRS4L2Q6PKH6 230 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 KRT73Q86Y46 540 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 LRRC18Q8N456 261 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 KLHL36Q8N4N3 616 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 SPICQ8N5J4 248 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 NFKBIDQ8NI38 313 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 IPCEF1Q8WWN9 437 aaPredicted RBP11.77□□□□□ -0.53
CCDC58-207ENST00000498466 TMEM43Q9BTV4 400 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 SPATA5L1Q9BVQ7 753 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 EGFL7Q9UHF1 273 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 SLC13A4Q9UKG4 626 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 INSIG2Q9Y5U4 225 aa11.77□□□□□ -0.53
CCDC58-207ENST00000498466 IGHV3OR16-10A0A075B7F0 116 aa11.76□□□□□ -0.53
CCDC58-207ENST00000498466 KNG1P01042 644 aa11.76□□□□□ -0.53
CCDC58-207ENST00000498466 IGHV2-70P01814 119 aa11.76□□□□□ -0.53
CCDC58-207ENST00000498466 PGA4P0DJD7 388 aa11.76□□□□□ -0.53
CCDC58-207ENST00000498466 PGA3P0DJD8 388 aa11.76□□□□□ -0.53
CCDC58-207ENST00000498466 BMP2P12643 396 aa11.76□□□□□ -0.53
CCDC58-207ENST00000498466 MPV17P39210 176 aa11.76□□□□□ -0.53
CCDC58-207ENST00000498466 ZNF84P51523 738 aa11.76□□□□□ -0.53
CCDC58-207ENST00000498466 CLRN1P58418 232 aa11.76□□□□□ -0.53
CCDC58-207ENST00000498466 SRSF4Q08170 494 aaKnown RBP11.76□□□□□ -0.53
CCDC58-207ENST00000498466 HNRNPA0Q13151 305 aaKnown RBP11.76□□□□□ -0.53
CCDC58-207ENST00000498466 C16orf87Q6PH81 154 aa11.76□□□□□ -0.53
CCDC58-207ENST00000498466 C17orf107Q6ZR85 190 aa11.76□□□□□ -0.53
CCDC58-207ENST00000498466 MSANTD1Q6ZTZ1 278 aa11.76□□□□□ -0.53
CCDC58-207ENST00000498466 JAZF1Q86VZ6 243 aa11.76□□□□□ -0.53
CCDC58-207ENST00000498466 HIPK4Q8NE63 616 aa11.76□□□□□ -0.53
CCDC58-207ENST00000498466 CCT8L2Q96SF2 557 aa11.76□□□□□ -0.53
CCDC58-207ENST00000498466 DIRC2Q96SL1 478 aa11.76□□□□□ -0.53
CCDC58-207ENST00000498466 CYSLTR2Q9NS75 346 aa11.76□□□□□ -0.53
CCDC58-207ENST00000498466 ARMCX1Q9P291 453 aa11.76□□□□□ -0.53
CCDC58-207ENST00000498466 EIF3KQ9UBQ5 218 aaKnown RBP11.76□□□□□ -0.53
CCDC58-207ENST00000498466 POLR3KQ9Y2Y1 108 aaPredicted RBP11.76□□□□□ -0.53
CCDC58-207ENST00000498466 ARHGAP32A7KAX9 2087 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 TRPC5OSA6NMA1 111 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 HDAC3O15379 428 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 TPST2O60704 377 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 IGHG1P01857 330 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 MMP7P09237 267 aaPredicted RBP11.75□□□□□ -0.53
CCDC58-207ENST00000498466 IGHV4-38-2P0DP08 117 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 STOMP27105 288 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 LIPAP38571 399 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 SLC6A9P48067 706 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 POLR2JP52435 117 aaKnown RBP11.75□□□□□ -0.53
CCDC58-207ENST00000498466 SEC61A1P61619 476 aaKnown RBP11.75□□□□□ -0.53
CCDC58-207ENST00000498466 BST1Q10588 318 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 NRN1LQ496H8 165 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms