RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 OR1E3Q8WZA6 343 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 APH1AQ96BI3 265 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 DAPP1Q9UN19 280 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 TEX51A0A1B0GUA7 166 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 B3GALT4O96024 378 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 KCNIP4Q6PIL6 250 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 SMIM15Q7Z3B0 74 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 LIN37Q96GY3 246 aaPredicted RBP17.59■□□□□ 0.41
COL27A1-207ENST00000494090 RAB22AQ9UL26 194 aa17.59■□□□□ 0.41
COL27A1-207ENST00000494090 OR6C76A6NM76 312 aa17.58■□□□□ 0.41
COL27A1-207ENST00000494090 P2RY10O00398 339 aa17.58■□□□□ 0.41
COL27A1-207ENST00000494090 SBK2P0C263 348 aa17.58■□□□□ 0.41
COL27A1-207ENST00000494090 P2RX1P51575 399 aa17.58■□□□□ 0.41
COL27A1-207ENST00000494090 RAB11AP62491 216 aa17.58■□□□□ 0.41
COL27A1-207ENST00000494090 TMEM31Q5JXX7 168 aa17.58■□□□□ 0.41
COL27A1-207ENST00000494090 FOXB2Q5VYV0 432 aa17.58■□□□□ 0.41
COL27A1-207ENST00000494090 CAMKMTQ7Z624 323 aa17.58■□□□□ 0.41
COL27A1-207ENST00000494090 ADGRE4PQ86SQ3 457 aa17.58■□□□□ 0.41
COL27A1-207ENST00000494090 OR4A16Q8NH70 328 aa17.58■□□□□ 0.41
COL27A1-207ENST00000494090 SLC7A6Q92536 515 aa17.58■□□□□ 0.41
COL27A1-207ENST00000494090 SLAMF9Q96A28 289 aa17.58■□□□□ 0.41
COL27A1-207ENST00000494090 A0A0U1RQK1 487 aa17.58■□□□□ 0.41
COL27A1-207ENST00000494090 A0A1W2PR48 441 aa17.58■□□□□ 0.41
COL27A1-207ENST00000494090 EIF4EP06730 217 aaKnown RBP17.58■□□□□ 0.41
COL27A1-207ENST00000494090 BCKDHBP21953 392 aa17.58■□□□□ 0.41
COL27A1-207ENST00000494090 IHHQ14623 411 aa17.58■□□□□ 0.41
COL27A1-207ENST00000494090 EGLN1Q9GZT9 426 aa17.58■□□□□ 0.41
COL27A1-207ENST00000494090 TAF1P21675 1872 aa17.58■□□□□ 0.4
COL27A1-207ENST00000494090 SPINT2O43291 252 aa17.58■□□□□ 0.4
COL27A1-207ENST00000494090 PMS2P2O95744 297 aa17.58■□□□□ 0.4
COL27A1-207ENST00000494090 OR1D5P58170 312 aa17.58■□□□□ 0.4
COL27A1-207ENST00000494090 TMEM71Q6P5X7 295 aa17.58■□□□□ 0.4
COL27A1-207ENST00000494090 SLC35A4Q96G79 324 aa17.58■□□□□ 0.4
COL27A1-207ENST00000494090 SDF2Q99470 211 aa17.58■□□□□ 0.4
COL27A1-207ENST00000494090 SLC25A21Q9BQT8 299 aaPredicted RBP17.58■□□□□ 0.4
COL27A1-207ENST00000494090 SNRNP70P08621 437 aaKnown RBP17.58■□□□□ 0.4
COL27A1-207ENST00000494090 HOXA1P49639 335 aaPredicted RBP17.58■□□□□ 0.4
COL27A1-207ENST00000494090 PYCR3Q53H96 274 aa17.58■□□□□ 0.4
COL27A1-207ENST00000494090 MAML2Q8IZL2 1156 aaPredicted RBP17.58■□□□□ 0.4
COL27A1-207ENST00000494090 NANPQ8TBE9 248 aa17.58■□□□□ 0.4
COL27A1-207ENST00000494090 ZNF775Q96BV0 537 aaPredicted RBP17.58■□□□□ 0.4
COL27A1-207ENST00000494090 BTF3L4Q96K17 158 aa17.58■□□□□ 0.4
COL27A1-207ENST00000494090 HRASLSQ9HDD0 168 aa17.58■□□□□ 0.4
COL27A1-207ENST00000494090 ISYNA1Q9NPH2 558 aa17.58■□□□□ 0.4
COL27A1-207ENST00000494090 ARRDC5A6NEK1 342 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 FXYD1O00168 92 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 PRICKLE3O43900 615 aaPredicted RBP17.57■□□□□ 0.4
COL27A1-207ENST00000494090 FBXO24O75426 580 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 GPX5O75715 221 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 ZNF728P0DKX0 622 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 GLULP15104 373 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 ZNF93P35789 620 aaPredicted RBP17.57■□□□□ 0.4
COL27A1-207ENST00000494090 TRMT12Q53H54 448 aaKnown RBP17.57■□□□□ 0.4
COL27A1-207ENST00000494090 PARM1Q6UWI2 310 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 ZNF808Q8N4W9 903 aaPredicted RBP17.57■□□□□ 0.4
COL27A1-207ENST00000494090 HAS2Q92819 552 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 WBP2Q969T9 261 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 SEC22AQ96IW7 307 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 ABHD6Q9BV23 337 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 GPR55Q9Y2T6 319 aaPredicted RBP17.57■□□□□ 0.4
COL27A1-207ENST00000494090 TOGARAM1Q9Y4F4 1720 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 TPOP07202 933 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 RBMS3Q6XE24 437 aaKnown RBP17.57■□□□□ 0.4
COL27A1-207ENST00000494090 CPEB3Q8NE35 698 aaKnown RBP17.57■□□□□ 0.4
COL27A1-207ENST00000494090 CDCP1Q9H5V8 836 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 FGF22Q9HCT0 170 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 FAM212BQ9NTI7 297 aaPredicted RBP17.57■□□□□ 0.4
COL27A1-207ENST00000494090 OR52A1Q9UKL2 312 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 CCL11P51671 97 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 BTN1A1Q13410 526 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 LIPHQ8WWY8 451 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 LRFN5Q96NI6 719 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 IKZF5Q9H5V7 419 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 ZNF732B4DXR9 585 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 KIR2DL3P43628 341 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 GLYATL3Q5SZD4 288 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 ZNF620Q6ZNG0 422 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 TDHQ8IZJ6 230 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 DYNC2LI1Q8TCX1 351 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 ELF4Q99607 663 aaPredicted RBP17.57■□□□□ 0.4
COL27A1-207ENST00000494090 CT45A6P0DMU7 189 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 CT45A5P0DMU8 189 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 CT45A7P0DMV0 189 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 CT45A8P0DMV1 189 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 CT45A9P0DMV2 189 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 PRPH2P23942 346 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 S100A11P31949 105 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 SLC19A1P41440 591 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 DMWDQ09019 674 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 CT45A2Q5DJT8 189 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 CT45A1Q5HYN5 189 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 RNLSQ5VYX0 342 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 OR52W1Q6IF63 320 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 ACSM5Q6NUN0 579 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 MARCH3Q86UD3 253 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 LINC00346Q8IVM7 164 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 CT45A3Q8NHU0 189 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 CPNE4Q96A23 557 aaPredicted RBP17.57■□□□□ 0.4
COL27A1-207ENST00000494090 Q96M85 177 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 RNF167Q9H6Y7 350 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms