RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 TSEN15Q8WW01 171 aaKnown RBP10.41□□□□□ -0.74
RFC4-214ENST00000494047 HMGB4Q8WW32 186 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 METTL21AQ8WXB1 218 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 TMEM234Q8WY98 164 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 TMEM106AQ96A25 262 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 KLHDC7BQ96G42 594 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 MAP6Q96JE9 813 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 C4orf45Q96LM5 186 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 Q96M85 177 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 OR8B4Q96RC9 309 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 DPYSL5Q9BPU6 564 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 DUSP15Q9H1R2 295 aaPredicted RBP10.41□□□□□ -0.74
RFC4-214ENST00000494047 RYDENQ9NUL5 291 aaKnown RBP10.41□□□□□ -0.74
RFC4-214ENST00000494047 VSX1Q9NZR4 365 aaPredicted RBP10.41□□□□□ -0.74
RFC4-214ENST00000494047 ZNF69Q9UC07 566 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 PISDQ9UG56 409 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 MRM2Q9UI43 246 aaKnown RBP10.41□□□□□ -0.74
RFC4-214ENST00000494047 CA5BQ9Y2D0 317 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 SPTBN4Q9H254 2564 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 ARHGEF17Q96PE2 2063 aaPredicted RBP10.41□□□□□ -0.74
RFC4-214ENST00000494047 TRBV23OR9-2A0A075B6M9 112 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 PLSCR5A0PG75 271 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 TMEM72A0PK05 275 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 C17orf105B2RV13 164 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 HCRTR1O43613 425 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 OR6A2O95222 327 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 UTS2O95399 124 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 LPLP06858 475 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 ZNF806P0C7X5 589 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 GP1BBP13224 206 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 GABRG2P18507 467 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 RAB6AP20340 208 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 ZP3P21754 424 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 S100A11P31949 105 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 CD96P40200 585 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 AQP2P41181 271 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 CDKN2AP42771 156 aaKnown RBP10.4□□□□□ -0.74
RFC4-214ENST00000494047 GSK3AP49840 483 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 CCR4P51679 360 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 POLR2HP52434 150 aaKnown RBP10.4□□□□□ -0.74
RFC4-214ENST00000494047 RIDAP52758 137 aaKnown RBP10.4□□□□□ -0.74
RFC4-214ENST00000494047 PNLIPRP2P54317 469 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 SLC37A1P57057 533 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 TAGLNQ01995 201 aaKnown RBP10.4□□□□□ -0.74
RFC4-214ENST00000494047 GLO1Q04760 184 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 RPL18Q07020 188 aaKnown RBP10.4□□□□□ -0.74
RFC4-214ENST00000494047 OPCMLQ14982 345 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 LGALSLQ3ZCW2 172 aaPredicted RBP10.4□□□□□ -0.74
RFC4-214ENST00000494047 PMS2CLQ68D20 193 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 DGLUCYQ7Z3D6 616 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 COMMD7Q86VX2 200 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 FRMD1Q8N878 549 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 TMEM229BQ8NBD8 167 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 RNF128Q8TEB7 428 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 PNPLA2Q96AD5 504 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 MMABQ96EY8 250 aaPredicted RBP10.4□□□□□ -0.74
RFC4-214ENST00000494047 LPAR4Q99677 370 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 TPSD1Q9BZJ3 242 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 PPA2Q9H2U2 334 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 CAPN10Q9HC96 672 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 LRIT1Q9P2V4 623 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 CLEC4AQ9UMR7 237 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 PI4KAP42356 2102 aa10.4□□□□□ -0.74
RFC4-214ENST00000494047 A0A1W2PPC4 97 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 RPS10-NUDT3A0A1W2PQS6 291 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 OR2M5A3KFT3 312 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 A8MVM7 634 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 F5H5P2 479 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 SMLR1H3BR10 107 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 I3L521 148 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 ADAM11O75078 769 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 UBCP0CG48 685 aaKnown RBP10.39□□□□□ -0.75
RFC4-214ENST00000494047 OR8G3PP0DMU2 310 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 RPA2P15927 270 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 PTNP21246 168 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 ACHEP22303 614 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 DCTDP32321 178 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 PSMB10P40306 273 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 DAP3P51398 398 aaKnown RBP10.39□□□□□ -0.75
RFC4-214ENST00000494047 PGDP52209 483 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 NANOS3P60323 173 aaKnown RBP10.39□□□□□ -0.75
RFC4-214ENST00000494047 GPR85P60893 370 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 RPL27P61353 136 aaKnown RBP10.39□□□□□ -0.75
RFC4-214ENST00000494047 SEC61A1P61619 476 aaKnown RBP10.39□□□□□ -0.75
RFC4-214ENST00000494047 SPEM2Q0P670 501 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 EIF3IQ13347 325 aaKnown RBP10.39□□□□□ -0.75
RFC4-214ENST00000494047 FZD2Q14332 565 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 LPAL2Q16609 132 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 PCGF3Q3KNV8 242 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 MESTQ5EB52 335 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 PHF19Q5T6S3 580 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 FAHD2BQ6P2I3 314 aaPredicted RBP10.39□□□□□ -0.75
RFC4-214ENST00000494047 TMEM205Q6UW68 189 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 UTS2BQ765I0 119 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 SLC29A4Q7RTT9 530 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 GRINAQ7Z429 371 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 RABEPKQ7Z6M1 372 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 KMT5CQ86Y97 462 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 SLC22A18ASQ8N1D0 253 aa10.39□□□□□ -0.75
RFC4-214ENST00000494047 ARL14Q8N4G2 192 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms