RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 BHLHE40O14503 412 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 GPR171O14626 319 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 HIST1H2ABP04908 130 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 ABOP16442 354 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 AHCYP23526 432 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 EDNRAP25101 427 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 ACVR2AP27037 513 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 SLC15A1P46059 708 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 GIPRP48546 466 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 CRISP1P54107 249 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 AQP4P55087 323 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 CDK5Q00535 292 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 NPRL3Q12980 569 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 PTGES3Q15185 160 aaKnown RBP8.33□□□□□ -1.08
CSTF1-206ENST00000493039 OCLNQ16625 522 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 ALG10Q5BKT4 473 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 CLEC12AQ5QGZ9 265 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 SAPCD1Q5SSQ6 148 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 PDSS1Q5T2R2 415 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 NSUN5P2Q63ZY6 315 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 TMEM225Q6GV28 225 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 FDX2Q6P4F2 183 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 HIST3H2AQ7L7L0 130 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 PXKQ7Z7A4 578 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 FJX1Q86VR8 437 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 CCDC71Q8IV32 467 aaPredicted RBP8.33□□□□□ -1.08
CSTF1-206ENST00000493039 OR8H3Q8N146 312 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 IQCF1Q8N6M8 205 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 PACRGLQ8N7B6 248 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 C9orf106Q8NAJ2 232 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 Q8NFD4 153 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 ZNF671Q8TAW3 534 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 PRR7Q8TB68 274 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 CHAC2Q8WUX2 184 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 HIST1H2ACQ93077 130 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 ZNF385AQ96PM9 386 aaKnown RBP8.33□□□□□ -1.08
CSTF1-206ENST00000493039 TRIB1Q96RU8 372 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 GPX7Q96SL4 187 aaPredicted RBP8.33□□□□□ -1.08
CSTF1-206ENST00000493039 ZNF556Q9HAH1 456 aa8.33□□□□□ -1.08
CSTF1-206ENST00000493039 KRCC1Q9NPI7 259 aaPredicted RBP8.33□□□□□ -1.08
CSTF1-206ENST00000493039 DDX28Q9NUL7 540 aaKnown RBP8.33□□□□□ -1.08
CSTF1-206ENST00000493039 IGKV3D-15A0A087WSY6 115 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 CD8B2A6NJW9 211 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 SLC22A20A6NK97 555 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 WDR1O75083 606 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 NDUFB2O95178 105 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 RCBTB2O95199 551 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 SNRNP70P08621 437 aaKnown RBP8.32□□□□□ -1.08
CSTF1-206ENST00000493039 POU1F1P28069 291 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 SLC16A1P53985 500 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 PRPS1P60891 318 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 ERVK-25P63136 954 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 HTD2P86397 168 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 POU4F3Q15319 338 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 GUSBP1Q15486 140 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 KCNJ8Q15842 424 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 CREB3L2Q70SY1 520 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 GPAT4Q86UL3 456 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 KLHL36Q8N4N3 616 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 OR9K2Q8NGE7 335 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 DNAJC9Q8WXX5 260 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 NMD3Q96D46 503 aaKnown RBP8.32□□□□□ -1.08
CSTF1-206ENST00000493039 OXGR1Q96P68 337 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 KATNB1Q9BVA0 655 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 TSSK6Q9BXA6 273 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 CALHM2Q9HA72 323 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 MED29Q9NX70 200 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 FLVCR1Q9Y5Y0 555 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 MYO18BQ8IUG5 2567 aa8.32□□□□□ -1.08
CSTF1-206ENST00000493039 PCNX1Q96RV3 2341 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 MBD3L4A6NDZ8 208 aaPredicted RBP8.31□□□□□ -1.08
CSTF1-206ENST00000493039 MBD3L3A6NE82 208 aaPredicted RBP8.31□□□□□ -1.08
CSTF1-206ENST00000493039 MBD3L5A6NJ08 208 aaPredicted RBP8.31□□□□□ -1.08
CSTF1-206ENST00000493039 ZAR1LA6NP61 321 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 H3BN98 237 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 IMPA2O14732 288 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 RNF13O43567 381 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 SERPINI2O75830 405 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 ZNF432O94892 652 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 VAMP5O95183 116 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 HRGP04196 525 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 CD14P08571 375 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 IFNGR1P15260 489 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 BCAP31P51572 246 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 CTXN1P60606 82 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 ESRRGP62508 458 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 EFNB1P98172 346 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 RASGEF1BQ0VAM2 473 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 FOXF2Q12947 444 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 GINS1Q14691 196 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 ACKR1Q16570 336 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 DPY19L2P2Q6ZN68 376 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 CHMP1BQ7LBR1 199 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 TUSC5Q8IXB3 177 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 LNX2Q8N448 690 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 MBD3L2Q8NHZ7 208 aaPredicted RBP8.31□□□□□ -1.08
CSTF1-206ENST00000493039 WNT2BQ93097 391 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 UBE2FQ969M7 185 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 MARC2Q969Z3 335 aa8.31□□□□□ -1.08
CSTF1-206ENST00000493039 COX4I2Q96KJ9 171 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms