RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 HSD17B8Q92506 261 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 AP3S1Q92572 193 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 SGTBQ96EQ0 304 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 KCNK17Q96T54 332 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 KLHDC3Q9BQ90 382 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 ZNF416Q9BWM5 594 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 NGBQ9NPG2 151 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 CISD1Q9NZ45 108 aaKnown RBP11.6□□□□□ -0.55
HDAC3-213ENST00000492506 VPS29Q9UBQ0 182 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 DUX4Q9UBX2 424 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 ENOPH1Q9UHY7 261 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 TMEFF2Q9UIK5 374 aaPredicted RBP11.6□□□□□ -0.55
HDAC3-213ENST00000492506 C19orf53Q9UNZ5 99 aaPredicted RBP11.6□□□□□ -0.55
HDAC3-213ENST00000492506 CMAHPQ9Y471 501 aa11.6□□□□□ -0.55
HDAC3-213ENST00000492506 HEATR1Q9H583 2144 aaKnown RBP11.6□□□□□ -0.55
HDAC3-213ENST00000492506 ZNF98A6NK75 572 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 MYO1GB0I1T2 1018 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 FAM220BPB1ANY3 271 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 ABCD4O14678 606 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 PCDH7O60245 1069 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 SNAPINO95295 136 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 UTS2O95399 124 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 SYNGR4O95473 234 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 OTCP00480 354 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 NCK1P16333 377 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 TSPAN8P19075 237 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 PTNP21246 168 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 FMO3P31513 532 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 MPIP34949 423 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 LIPAP38571 399 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 MAGEA2P43356 314 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 SSTP61278 116 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 ZNF273Q14593 569 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 PLPPR5Q32ZL2 321 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 KDM4DQ6B0I6 523 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 ESPNLQ6ZVH7 1005 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 CDH26Q8IXH8 852 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 ARIH2OSQ8N7S6 290 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 OR4M2Q8NGB6 313 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 POC1BQ8TC44 478 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 RNF128Q8TEB7 428 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 UBASH3BQ8TF42 649 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 C16orf78Q8WTQ4 265 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 ABHD3Q8WU67 409 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 ROBO4Q8WZ75 1007 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 RBPMSQ93062 196 aaKnown RBP11.59□□□□□ -0.55
HDAC3-213ENST00000492506 CREB3L1Q96BA8 519 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 TBL1XR1Q9BZK7 514 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 RBFOX1Q9NWB1 397 aaKnown RBP11.59□□□□□ -0.55
HDAC3-213ENST00000492506 LPAR3Q9UBY5 353 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 PSORS1C1Q9UIG5 152 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 BAIAP2Q9UQB8 552 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 SNX8Q9Y5X2 465 aa11.59□□□□□ -0.55
HDAC3-213ENST00000492506 ARFGEF3Q5TH69 2177 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 A0A087WZY1 265 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 A0A1B0GVI7 797 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 A0A1W2PQ09 198 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 ZNF814B7Z6K7 855 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 E9PQ18 207 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 M0R082 166 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 MANBAO00462 879 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 WIPF1O43516 503 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 GMDSO60547 372 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 OR4F21O95013 312 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 ADAP00813 363 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 HSD3B1P14060 373 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 HSD3B2P26439 372 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 SHC1P29353 583 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 RGS6P49758 472 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 CASP9P55211 416 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 C21orf58P58505 322 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 HEPACAMQ14CZ8 416 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 ZNF239Q16600 458 aaKnown RBP11.58□□□□□ -0.56
HDAC3-213ENST00000492506 BAK1Q16611 211 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 RABL3Q5HYI8 236 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 HBMQ6B0K9 141 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 C11orf71Q6IPW1 123 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 TMEM107Q6UX40 140 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 TUSC5Q8IXB3 177 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 OR2L13Q8N349 312 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-213ENST00000492506 GLB1L3Q8NCI6 653 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-213ENST00000492506 OR2T12Q8NG77 320 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 OR9Q1Q8NGQ5 310 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 ST8SIA4Q92187 359 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 SLC9A6Q92581 669 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 OSTF1Q92882 214 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 FAM162AQ96A26 154 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 APIPQ96GX9 242 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 NEDD4LQ96PU5 975 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 ZBTB18Q99592 522 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 USB1Q9BQ65 265 aaKnown RBP11.58□□□□□ -0.56
HDAC3-213ENST00000492506 LMF2Q9BU23 707 aaKnown RBP11.58□□□□□ -0.56
HDAC3-213ENST00000492506 C1QTNF3Q9BXJ4 246 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 POTEKPQ9BYX7 375 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 TMEM185BQ9H7F4 350 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 Q9N2J8 555 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 CNOT2Q9NZN8 540 aaKnown RBP11.58□□□□□ -0.56
HDAC3-213ENST00000492506 SAMD4AQ9UPU9 718 aaKnown RBP11.58□□□□□ -0.56
HDAC3-213ENST00000492506 FIS1Q9Y3D6 152 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms