RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 ZNF24P17028 368 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 SLC26A3P40879 764 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 AQP2P41181 271 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 NAA10P41227 235 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 SYKP43405 635 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 RFX3P48380 749 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 TMED10P49755 219 aaKnown RBP1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 UCNP55089 124 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 RAB10P61026 200 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 PAX5Q02548 391 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 AQP6Q13520 282 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 MRPL23Q16540 153 aaKnown RBP1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 RFX4Q33E94 735 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 COA6Q5JTJ3 125 aaKnown RBP1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 AGBL2Q5U5Z8 902 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 C9orf135Q5VTT2 229 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 ANKRD26P1Q6NSI1 321 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 IGFL3Q6UXB1 125 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 LYPD2Q6UXB3 125 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 CERS6Q6ZMG9 384 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 PEX26Q7Z412 305 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 CAMK2N1Q7Z7J9 78 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 SCD5Q86SK9 330 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 BIVMQ86UB2 503 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 ENTHD1Q8IYW4 607 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 HSD17B11Q8NBQ5 300 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 OR51G1Q8NGK1 321 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 OR10R2Q8NGX6 335 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 OR6X1Q8NH79 312 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 RHEBL1Q8TAI7 183 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 GIMAP1Q8WWP7 306 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 NRGNQ92686 78 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 CCDC126Q96EE4 140 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 AURKBQ96GD4 344 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 TSNARE1Q96NA8 513 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 SH3GL3Q99963 347 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 C20orf24Q9BUV8 137 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 OSBPL10Q9BXB5 764 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 GABARAPL3Q9BY60 117 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 LCE3DQ9BYE3 92 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 CLMPQ9H6B4 373 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 EXO5Q9H790 373 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 GEMIN7Q9H840 131 aaKnown RBP1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 SLCO1B3Q9NPD5 702 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 CTPS2Q9NRF8 586 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 GPATCH2LQ9NWQ4 482 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 SHPKQ9UHJ6 478 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 VANGL2Q9ULK5 521 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 ING4Q9UNL4 249 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 TMED5Q9Y3A6 229 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 HEBP2Q9Y5Z4 205 aa1.78□□□□□ -2.12
HMGB1P30-201ENST00000492455 WDR62O43379 1518 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 PDS5BQ9NTI5 1447 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 USP47Q96K76 1375 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 TRBV9A0A0B4J1U6 114 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 TRAV39A0A0B4J263 110 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 SERTM2A0A1B0GWG4 89 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 PLAC8L1A1L4L8 177 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 LRRIQ3A6PVS8 624 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 H3BNH8 94 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 CDC7O00311 574 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 PES1O00541 588 aaKnown RBP1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 LSM1O15116 133 aaKnown RBP1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 EIF3HO15372 352 aaKnown RBP eCLIP1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 CD5LO43866 347 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 CACNG3O60359 315 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 SUPT3HO75486 399 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 CTAG2O75638 210 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 UTS2O95399 124 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 H6PDO95479 791 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 C6orf47O95873 294 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 BGLAPP02818 100 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 SMIM10L1P0DMW3 83 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 CNR1P21554 472 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 RRM2P31350 389 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 FOXN2P32314 431 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 SERPINB5P36952 375 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 CDKN1BP46527 198 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 ATP5OP48047 213 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 PPOXP50336 477 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 NCBP2P52298 156 aaKnown RBP eCLIP1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 ZNF136P52737 540 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 ACTA2P62736 377 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 RPS21P63220 83 aaKnown RBP1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 ACTG2P63267 376 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 ACTC1P68032 377 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 ACTA1P68133 377 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 CHRNA6Q15825 494 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 ZBED5Q49AG3 693 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 C22orf42Q6IC83 251 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 TMEM220Q6QAJ8 160 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 LINC00173Q6ZV60 143 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 BZW1Q7L1Q6 419 aaKnown RBP1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 CENPQQ7L2Z9 268 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 SLC16A14Q7RTX9 510 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 OFCC1Q8IZS5 231 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 IQCKQ8N0W5 287 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 ZNF786Q8N393 782 aa1.77□□□□□ -2.13
HMGB1P30-201ENST00000492455 LIX1Q8N485 282 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms