RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 LYPD3O95274 346 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 ANP32DO95626 131 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 IGHV2-70P01814 119 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 THY1P04216 161 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 PGA4P0DJD7 388 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 PGA3P0DJD8 388 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 ADORA3P0DMS8 318 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 ETS2P15036 469 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 ZNF12P17014 697 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 LSP1P33241 339 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 ZNF81P51508 661 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 SELENOVP59797 346 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 IL13RA1P78552 427 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 ZNF154Q13106 437 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 MELKQ14680 651 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 OCLNQ16625 522 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 PDCD4Q53EL6 469 aaKnown RBP11.16□□□□□ -0.62
USF1-206ENST00000491629 SPATA46Q5T0L3 261 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 LINC00114Q6XXX2 140 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 JAZF1Q86VZ6 243 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 SNX32Q86XE0 403 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 SYT14Q8NB59 555 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 ICA1LQ8NDH6 482 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 OR5J2Q8NH18 312 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 NFKBIDQ8NI38 313 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 IPCEF1Q8WWN9 437 aaPredicted RBP11.16□□□□□ -0.62
USF1-206ENST00000491629 GEMIN6Q8WXD5 167 aaKnown RBP11.16□□□□□ -0.62
USF1-206ENST00000491629 POP5Q969H6 163 aaKnown RBP11.16□□□□□ -0.62
USF1-206ENST00000491629 ELMOD3Q96FG2 381 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 MARS2Q96GW9 593 aaKnown RBP11.16□□□□□ -0.62
USF1-206ENST00000491629 TIMD4Q96H15 378 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 ZBTB18Q99592 522 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 BCL2L14Q9BZR8 327 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 THUMPD1Q9NXG2 353 aaKnown RBP11.16□□□□□ -0.62
USF1-206ENST00000491629 SLC25A37Q9NYZ2 338 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 PDP1Q9P0J1 537 aaPredicted RBP11.16□□□□□ -0.62
USF1-206ENST00000491629 LOC100509620A0A075B734 347 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 ISPDA4D126 451 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 CLDN34H7C241 214 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 CLIC1O00299 241 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 TPD52L2O43399 206 aaKnown RBP11.15□□□□□ -0.62
USF1-206ENST00000491629 IGHV4-38-2P0DP08 117 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 OMGP23515 440 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 ATP4BP51164 291 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 IFFO1Q0D2I5 559 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 STX3Q13277 289 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 HIST3H3Q16695 136 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 ARMCX4Q5H9R4 360 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 FAM209AQ5JX71 171 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 THEM4Q5T1C6 240 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 RBMS3Q6XE24 437 aaKnown RBP11.15□□□□□ -0.62
USF1-206ENST00000491629 MAVSQ7Z434 540 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 TSPYL5Q86VY4 417 aaPredicted RBP11.15□□□□□ -0.62
USF1-206ENST00000491629 OR1J1Q8NGS3 322 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 ITCHQ96J02 903 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 EPYCQ99645 322 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 TMEM43Q9BTV4 400 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 ZMAT3Q9HA38 289 aaKnown RBP11.15□□□□□ -0.62
USF1-206ENST00000491629 SLAMF8Q9P0V8 285 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 KLHL21Q9UJP4 597 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 INSIG2Q9Y5U4 225 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 AUP1Q9Y679 476 aa11.15□□□□□ -0.62
USF1-206ENST00000491629 IGHV3OR16-10A0A075B7F0 116 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 TMEM247A6NEH6 219 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 MGRN1O60291 552 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 ADH4P08319 380 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 QDPRP09417 244 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 VSNL1P62760 191 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 FADDQ13158 208 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 TBC1D28Q2M2D7 210 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 C6orf10Q5SRN2 563 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 TMEM53Q6P2H8 277 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 SLC2A7Q6PXP3 512 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 MSANTD1Q6ZTZ1 278 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 SLC16A14Q7RTX9 510 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 LRRC18Q8N456 261 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 C10orf53Q8N6V4 93 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.14□□□□□ -0.63
USF1-206ENST00000491629 SLC25A44Q96H78 314 aaPredicted RBP11.14□□□□□ -0.63
USF1-206ENST00000491629 MAELQ96JY0 434 aaKnown RBP11.14□□□□□ -0.63
USF1-206ENST00000491629 ZNF347Q96SE7 839 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 GPA33Q99795 319 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 TMEM109Q9BVC6 243 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 IKZF5Q9H5V7 419 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 RNF121Q9H920 327 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 CACYBPQ9HB71 228 aaKnown RBP11.14□□□□□ -0.63
USF1-206ENST00000491629 SDR39U1Q9NRG7 319 aaPredicted RBP11.14□□□□□ -0.63
USF1-206ENST00000491629 ZIM2Q9NZV7 527 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 TESQ9UGI8 421 aaKnown RBP11.14□□□□□ -0.63
USF1-206ENST00000491629 EGFL7Q9UHF1 273 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 TRIM33Q9UPN9 1127 aa11.14□□□□□ -0.63
USF1-206ENST00000491629 MDFIC2A0A1B0GVS7 189 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 F5H0A9 414 aaPredicted RBP11.13□□□□□ -0.63
USF1-206ENST00000491629 HDAC3O15379 428 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 FOXH1O75593 365 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 IGHMP01871 453 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 IDO1P14902 403 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 DRD4P21917 467 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 GCH1P30793 250 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 CD80P33681 288 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms