RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 PLP2Q04941 152 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 FOXL1Q12952 345 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 MOGQ16653 247 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 SLC36A2Q495M3 483 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 LRIF1Q5T3J3 769 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 SWT1Q5T5J6 900 aaKnown RBP14.41□□□□□ -0.1
TOP3B-217ENST00000489581 SHISA2Q6UWI4 295 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 LINC00114Q6XXX2 140 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 RETREG3Q86VR2 466 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 ARMC8Q8IUR7 673 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 LRRC18Q8N456 261 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 LRRC17Q8N6Y2 441 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 SMYD1Q8NB12 490 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 RBM15BQ8NDT2 890 aaKnown RBP14.41□□□□□ -0.1
TOP3B-217ENST00000489581 OR1J1Q8NGS3 322 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 CCL17Q92583 94 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 DVL3Q92997 716 aaPredicted RBP14.41□□□□□ -0.1
TOP3B-217ENST00000489581 DUX5Q96PT3 197 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 C1QTNF5Q9BXJ0 243 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 LRMDAQ9H2I8 198 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 C1orf198Q9H425 327 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 ZNF696Q9H7X3 374 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 NTN4Q9HB63 628 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 VAPAQ9P0L0 249 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 TGP01266 2768 aa14.41□□□□□ -0.1
TOP3B-217ENST00000489581 TMEM120BA0PK00 339 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 ISPDA4D126 451 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 SPRY3O43610 288 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 SERPINB7O75635 380 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 MFN2O95140 757 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 FSHBP01225 129 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 IGHV3-13P01766 116 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 MT-ND5P03915 603 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 HKR1P10072 659 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 CCNOP22674 350 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 ZNF81P51508 661 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 ZNF74Q16587 644 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 PAGE3Q5JUK9 113 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 ZNF613Q6PF04 617 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 DPPA2Q7Z7J5 298 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 SIGLECL1Q8N7X8 197 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 BHLHE22Q8NFJ8 381 aaPredicted RBP14.4□□□□□ -0.1
TOP3B-217ENST00000489581 ELMOD3Q96FG2 381 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 IKZF5Q9H5V7 419 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 TMEM38AQ9H6F2 299 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 NANSQ9NR45 359 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 UBAP1Q9NZ09 502 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 DOCK11Q5JSL3 2073 aa14.4□□□□□ -0.1
TOP3B-217ENST00000489581 CPSF4LA6NMK7 179 aaKnown RBP14.39□□□□□ -0.11
TOP3B-217ENST00000489581 KPNA4O00629 521 aaPredicted RBP14.39□□□□□ -0.11
TOP3B-217ENST00000489581 CHP2O43745 196 aa14.39□□□□□ -0.11
TOP3B-217ENST00000489581 IGHV1-46P01743 117 aa14.39□□□□□ -0.11
TOP3B-217ENST00000489581 PPIBP23284 216 aaKnown RBP14.39□□□□□ -0.11
TOP3B-217ENST00000489581 APLNRP35414 380 aa14.39□□□□□ -0.11
TOP3B-217ENST00000489581 CLRN1P58418 232 aa14.39□□□□□ -0.11
TOP3B-217ENST00000489581 HSF2Q03933 536 aa14.39□□□□□ -0.11
TOP3B-217ENST00000489581 SPATA46Q5T0L3 261 aa14.39□□□□□ -0.11
TOP3B-217ENST00000489581 TTC33Q6PID6 262 aaPredicted RBP14.39□□□□□ -0.11
TOP3B-217ENST00000489581 TREML1Q86YW5 311 aa14.39□□□□□ -0.11
TOP3B-217ENST00000489581 FUNDC1Q8IVP5 155 aa14.39□□□□□ -0.11
TOP3B-217ENST00000489581 MCHR2Q969V1 340 aa14.39□□□□□ -0.11
TOP3B-217ENST00000489581 ZNF347Q96SE7 839 aa14.39□□□□□ -0.11
TOP3B-217ENST00000489581 IGHG1P01857 330 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 OPN1SWP03999 348 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 THY1P04216 161 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 HIST1H2ABP04908 130 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 MMP7P09237 267 aaPredicted RBP14.38□□□□□ -0.11
TOP3B-217ENST00000489581 UMPSP11172 480 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 GPX2P18283 190 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 ZFP36P26651 326 aaKnown RBP14.38□□□□□ -0.11
TOP3B-217ENST00000489581 MPV17P39210 176 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 ZNF84P51523 738 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 STX1BP61266 288 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 HNRNPA0Q13151 305 aaKnown RBP14.38□□□□□ -0.11
TOP3B-217ENST00000489581 NPTX1Q15818 432 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 DUSP7Q16829 419 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 ZNF718Q3SXZ3 478 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 PABPC1L2AQ5JQF8 200 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 TMEM255AQ5JRV8 349 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 FAM209AQ5JX71 171 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 ENTPD8Q5MY95 495 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 THEM4Q5T1C6 240 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 BLOC1S3Q6QNY0 202 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 RBMS3Q6XE24 437 aaKnown RBP14.38□□□□□ -0.11
TOP3B-217ENST00000489581 HIST3H2AQ7L7L0 130 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 SYT14Q8NB59 555 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 CPEB3Q8NE35 698 aaKnown RBP14.38□□□□□ -0.11
TOP3B-217ENST00000489581 HIPK4Q8NE63 616 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 OR6T1Q8NGN1 323 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 HIST1H2ACQ93077 130 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 SPDL1Q96EA4 605 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 ARHGDIGQ99819 225 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 EVA1AQ9H8M9 152 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 CCDC167Q9P0B6 97 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 TRIM33Q9UPN9 1127 aa14.38□□□□□ -0.11
TOP3B-217ENST00000489581 TRBV5-3A0A0A0MS03 114 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 EVPLLA8MZ36 301 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 BLOC1S5-TXNDC5H3BN57 136 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 FMO6PO60774 539 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 UBOX5O94941 541 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms