RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 CCL8P80075 99 aa15.73■□□□□ 0.11
HDAC6-231ENST00000488905 HIST3H3Q16695 136 aa15.73■□□□□ 0.11
HDAC6-231ENST00000488905 PCGF3Q3KNV8 242 aa15.73■□□□□ 0.11
HDAC6-231ENST00000488905 MMEL1Q495T6 779 aa15.73■□□□□ 0.11
HDAC6-231ENST00000488905 TMEM154Q6P9G4 183 aa15.73■□□□□ 0.11
HDAC6-231ENST00000488905 C12orf54Q6X4T0 127 aa15.73■□□□□ 0.11
HDAC6-231ENST00000488905 HIST3H2AQ7L7L0 130 aa15.73■□□□□ 0.11
HDAC6-231ENST00000488905 ZNF519Q8TB69 540 aa15.73■□□□□ 0.11
HDAC6-231ENST00000488905 DYDC1Q8WWB3 177 aa15.73■□□□□ 0.11
HDAC6-231ENST00000488905 STON2Q8WXE9 905 aa15.73■□□□□ 0.11
HDAC6-231ENST00000488905 HIST1H2ACQ93077 130 aa15.73■□□□□ 0.11
HDAC6-231ENST00000488905 MCHR2Q969V1 340 aa15.73■□□□□ 0.11
HDAC6-231ENST00000488905 ZNF347Q96SE7 839 aa15.73■□□□□ 0.11
HDAC6-231ENST00000488905 KAT8Q9H7Z6 458 aaKnown RBP15.73■□□□□ 0.11
HDAC6-231ENST00000488905 MEPEQ9NQ76 525 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-231ENST00000488905 SLCO1C1Q9NYB5 712 aa15.73■□□□□ 0.11
HDAC6-231ENST00000488905 IQCMA0A1B0GVH7 501 aa15.72■□□□□ 0.11
HDAC6-231ENST00000488905 MCIDASD6RGH6 385 aa15.72■□□□□ 0.11
HDAC6-231ENST00000488905 CDC14BO60729 498 aa15.72■□□□□ 0.11
HDAC6-231ENST00000488905 PTHP01270 115 aa15.72■□□□□ 0.11
HDAC6-231ENST00000488905 VIMP08670 466 aaKnown RBP15.72■□□□□ 0.11
HDAC6-231ENST00000488905 ZNF84P51523 738 aa15.72■□□□□ 0.11
HDAC6-231ENST00000488905 MYBPC1Q00872 1141 aa15.72■□□□□ 0.11
HDAC6-231ENST00000488905 RUNX1T1Q06455 604 aa15.72■□□□□ 0.11
HDAC6-231ENST00000488905 RPL18Q07020 188 aaKnown RBP15.72■□□□□ 0.11
HDAC6-231ENST00000488905 INTS11Q5TA45 600 aaKnown RBP15.72■□□□□ 0.11
HDAC6-231ENST00000488905 ICA1LQ8NDH6 482 aa15.72■□□□□ 0.11
HDAC6-231ENST00000488905 RBM15BQ8NDT2 890 aaKnown RBP15.72■□□□□ 0.11
HDAC6-231ENST00000488905 OR1J2Q8NGS2 313 aa15.72■□□□□ 0.11
HDAC6-231ENST00000488905 SLC26A7Q8TE54 656 aa15.72■□□□□ 0.11
HDAC6-231ENST00000488905 C11orf40Q8WZ69 217 aa15.72■□□□□ 0.11
HDAC6-231ENST00000488905 SEPHS2Q99611 448 aa15.72■□□□□ 0.11
HDAC6-231ENST00000488905 PRSS27Q9BQR3 290 aa15.72■□□□□ 0.11
HDAC6-231ENST00000488905 BCL2L14Q9BZR8 327 aa15.72■□□□□ 0.11
HDAC6-231ENST00000488905 ZNF665Q9H7R5 613 aa15.72■□□□□ 0.11
HDAC6-231ENST00000488905 NKIRAS2Q9NYR9 191 aa15.72■□□□□ 0.11
HDAC6-231ENST00000488905 ARHGAP32A7KAX9 2087 aa15.72■□□□□ 0.11
HDAC6-231ENST00000488905 A0A1W2PRG6 482 aa15.71■□□□□ 0.11
HDAC6-231ENST00000488905 CENPBD1B2RD01 187 aa15.71■□□□□ 0.11
HDAC6-231ENST00000488905 BLOC1S5-TXNDC5H3BN57 136 aa15.71■□□□□ 0.11
HDAC6-231ENST00000488905 MMP7P09237 267 aaPredicted RBP15.71■□□□□ 0.11
HDAC6-231ENST00000488905 RAD52P43351 418 aa15.71■□□□□ 0.11
HDAC6-231ENST00000488905 CRYBA2P53672 197 aa15.71■□□□□ 0.11
HDAC6-231ENST00000488905 UCP2P55851 309 aa15.71■□□□□ 0.11
HDAC6-231ENST00000488905 PLP2Q04941 152 aa15.71■□□□□ 0.11
HDAC6-231ENST00000488905 NFYCQ13952 458 aa15.71■□□□□ 0.11
HDAC6-231ENST00000488905 AVPI1Q5T686 147 aa15.71■□□□□ 0.11
HDAC6-231ENST00000488905 FAHD2BQ6P2I3 314 aaPredicted RBP15.71■□□□□ 0.11
HDAC6-231ENST00000488905 THSD4Q6ZMP0 1018 aa15.71■□□□□ 0.11
HDAC6-231ENST00000488905 HDDC2Q7Z4H3 204 aa15.71■□□□□ 0.11
HDAC6-231ENST00000488905 OR10A6Q8NH74 314 aa15.71■□□□□ 0.11
HDAC6-231ENST00000488905 ZNF418Q8TF45 676 aaPredicted RBP15.71■□□□□ 0.11
HDAC6-231ENST00000488905 RASSF5Q8WWW0 418 aa15.71■□□□□ 0.11
HDAC6-231ENST00000488905 ASB10Q8WXI3 467 aa15.71■□□□□ 0.11
HDAC6-231ENST00000488905 FAHD2AQ96GK7 314 aa15.71■□□□□ 0.11
HDAC6-231ENST00000488905 MRPL13Q9BYD1 178 aaKnown RBP15.71■□□□□ 0.11
HDAC6-231ENST00000488905 LRMDAQ9H2I8 198 aa15.71■□□□□ 0.11
HDAC6-231ENST00000488905 G6PC2Q9NQR9 355 aa15.71■□□□□ 0.11
HDAC6-231ENST00000488905 MT-ND1P03886 318 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 F13BP05160 661 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 CFPP27918 469 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 APLNRP35414 380 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 CRYBB2P43320 205 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 DAP3P51398 398 aaKnown RBP15.7■□□□□ 0.1
HDAC6-231ENST00000488905 ZNF133P52736 654 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-231ENST00000488905 UGT2B15P54855 530 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 ACTG1P63261 375 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 TEKQ02763 1124 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 MVKQ03426 396 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 HSF2Q03933 536 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 GLO1Q04760 184 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 TTMPQ5BVD1 217 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 C10orf128Q5T292 105 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 LRRC18Q8N456 261 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 SYT14Q8NB59 555 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 PFN4Q8NHR9 129 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 TSPEARQ8WU66 669 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 GTF3AQ92664 365 aaKnown RBP15.7■□□□□ 0.1
HDAC6-231ENST00000488905 RAB39BQ96DA2 213 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 THOC1Q96FV9 657 aaKnown RBP15.7■□□□□ 0.1
HDAC6-231ENST00000488905 ATP6V1G3Q96LB4 118 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 SAP30LQ9HAJ7 183 aa15.7■□□□□ 0.1
HDAC6-231ENST00000488905 IGHV1-69-2A0A0G2JMI3 117 aa15.69■□□□□ 0.1
HDAC6-231ENST00000488905 CLDN25C9JDP6 229 aa15.69■□□□□ 0.1
HDAC6-231ENST00000488905 DEAF1O75398 565 aaPredicted RBP15.69■□□□□ 0.1
HDAC6-231ENST00000488905 TRMUO75648 421 aaKnown RBP15.69■□□□□ 0.1
HDAC6-231ENST00000488905 RGS9O75916 674 aaPredicted RBP15.69■□□□□ 0.1
HDAC6-231ENST00000488905 OR7A10O76100 309 aa15.69■□□□□ 0.1
HDAC6-231ENST00000488905 SLC2A10O95528 541 aa15.69■□□□□ 0.1
HDAC6-231ENST00000488905 MT-ND5P03915 603 aa15.69■□□□□ 0.1
HDAC6-231ENST00000488905 ANPEPP15144 967 aa15.69■□□□□ 0.1
HDAC6-231ENST00000488905 EPHA1P21709 976 aa15.69■□□□□ 0.1
HDAC6-231ENST00000488905 DRD4P21917 467 aa15.69■□□□□ 0.1
HDAC6-231ENST00000488905 RBM34P42696 430 aaKnown RBP15.69■□□□□ 0.1
HDAC6-231ENST00000488905 VMACQ2NL98 169 aa15.69■□□□□ 0.1
HDAC6-231ENST00000488905 ACSM5Q6NUN0 579 aa15.69■□□□□ 0.1
HDAC6-231ENST00000488905 C1orf229Q6ZS94 237 aaPredicted RBP15.69■□□□□ 0.1
HDAC6-231ENST00000488905 USP51Q70EK9 711 aa15.69■□□□□ 0.1
HDAC6-231ENST00000488905 CCDC80Q76M96 950 aa15.69■□□□□ 0.1
HDAC6-231ENST00000488905 TEX29Q8N6K0 151 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms