RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 ELOVL3Q9HB03 270 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 PATZ1Q9HBE1 687 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 PSMC3IPQ9P2W1 217 aaPredicted RBP2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 KAAG1Q9UBP8 84 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 DSCAMO60469 2012 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 MED12LQ86YW9 2145 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 DYNC2H1Q8NCM8 4307 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 KNL1Q8NG31 2342 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 CIB4A0PJX0 185 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 FAM90A20PA6NIJ5 464 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 C17orf100A8MU93 164 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 RNASEK-C17orf49H0YIS7 233 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 C3orf84H3BNL1 204 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 GTPBP1O00178 669 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 AP4M1O00189 453 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 RTCAO00442 366 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 IMPA2O14732 288 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 PHYHO14832 338 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 AZIN1O14977 448 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 SCO2O43819 266 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 EFNA2O43921 213 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 FAM20BO75063 409 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 GPANK1O95872 356 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 IGFBP1P08833 259 aaPredicted RBP2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 CST2P09228 141 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 OR4A8P0C604 315 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 MYZAPP0CAP1 466 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 MYL2P10916 166 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 SDC1P18827 310 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 GSTM3P21266 225 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 AZGP1P25311 298 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 CFHR2P36980 270 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 CENPAP49450 140 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 RPP30P78346 268 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 MXRA7P84157 204 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 NPTX1Q15818 432 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 IMPG1Q17R60 797 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 BEAN1Q3B7T3 259 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 GAGE13Q4V321 117 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 LCN1P1Q5VSP4 162 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 C16orf62Q7Z3J2 963 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 RNF144BQ7Z419 303 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 CPLX4Q7Z7G2 160 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 CALHM1Q8IU99 346 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 ZBED8Q8IZ13 594 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 BPIFB2Q8N4F0 458 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 KLHL36Q8N4N3 616 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 OR4S1Q8NGB4 309 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 METTL6Q8TCB7 284 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 GPR151Q8TDV0 419 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 XAGE5Q8WWM1 108 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 RASSF5Q8WWW0 418 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC25A28Q96A46 364 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 C12orf43Q96C57 262 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 PLEKHA8Q96JA3 519 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 SAMD8Q96LT4 415 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 OR7D2Q96RA2 312 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 MTERF1Q99551 399 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 FAM118BQ9BPY3 351 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 ANKRD19PQ9H560 264 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 SP140LQ9H930 580 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 HINT3Q9NQE9 182 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 RLIMQ9NVW2 624 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 DNAJB9Q9UBS3 223 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 OR5V1Q9UGF6 321 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 CIDEBQ9UHD4 219 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF229Q9UJW7 825 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 PRPF19Q9UMS4 504 aaKnown RBP2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 TMED7Q9Y3B3 224 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 KPTNQ9Y664 436 aa2.31□□□□□ -2.04
DEPDC1-203ENST00000488146 GNG14A0A1W2PPG7 69 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 KRT87PA6NCN2 255 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 OR2W5A6NFC9 320 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 CFAP73A6NFT4 308 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 A6NIZ1 184 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 DHHO43323 396 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 NCR1O76036 304 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 SCAF4O95104 1147 aaKnown RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 AHSA1O95433 338 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 QDPRP09417 244 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 CECR9P0C854 216 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 HOXB6P17509 224 aaKnown RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 TNFRSF1AP19438 455 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 FEN1P39748 380 aaKnown RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 MDH2P40926 338 aaKnown RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 CD200P41217 278 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 KIR3DL2P43630 455 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 STARP49675 285 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 SLURP1P55000 103 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 RAP1BP61224 184 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 RAP1AP62834 184 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 ACTG1P63261 375 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 MRPS34P82930 218 aaKnown RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 SRYQ05066 204 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 CAMK2DQ13557 499 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 MELKQ14680 651 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 HERPUD1Q15011 391 aa2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 LARS2Q15031 903 aaKnown RBP2.3□□□□□ -2.04
DEPDC1-203ENST00000488146 LTB4RQ15722 352 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms