RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 G6PC2Q9NQR9 355 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 HIF1ANQ9NWT6 349 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 TREM2Q9NZC2 230 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 VSX1Q9NZR4 365 aaPredicted RBP3.91□□□□□ -1.78
CKS1B-207ENST00000477676 UPB1Q9UBR1 384 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 SEC14L4Q9UDX3 406 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 FAF1Q9UNN5 650 aaPredicted RBP3.91□□□□□ -1.78
CKS1B-207ENST00000477676 SLC9A8Q9Y2E8 581 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 LRP12Q9Y561 859 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 PCDHGB1Q9Y5G3 927 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 PLXNB1O43157 2135 aa3.91□□□□□ -1.78
CKS1B-207ENST00000477676 LOC105371242A0A075B767 164 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 RNF103-CHMP3A0A140T963 221 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 AQP7P3A6NL99 342 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 FTCDNL1E5RQL4 147 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 SLCO1B7G3V0H7 640 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 HMGN4O00479 90 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ANKRD28O15084 1053 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF208O43345 1280 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 NPIPB7O75200 414 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 GLRA3O75311 464 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 CRCPO75575 148 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 RP2O75695 350 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 SEC14L2O76054 403 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 CSTBP04080 98 aaKnown RBP3.9□□□□□ -1.79
CKS1B-207ENST00000477676 CHRM4P08173 479 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 GUSBP08236 651 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 GKN3PP0CG01 181 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 G6PDP11413 515 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 NEFHP12036 1026 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 PRG2P13727 222 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 CPA3P15088 417 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ADRA2CP18825 462 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 TCN1P20061 433 aaPredicted RBP3.9□□□□□ -1.79
CKS1B-207ENST00000477676 NPR2P20594 1047 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 RPS4Y1P22090 263 aaKnown RBP3.9□□□□□ -1.79
CKS1B-207ENST00000477676 TACR3P29371 465 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ALDH3A1P30838 453 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 SOAT1P35610 550 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 HPCAL1P37235 193 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 RBMXP38159 391 aaKnown RBP3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ACAA2P42765 397 aaKnown RBP3.9□□□□□ -1.79
CKS1B-207ENST00000477676 MAGEA8P43361 318 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 CLK1P49759 484 aaKnown RBP3.9□□□□□ -1.79
CKS1B-207ENST00000477676 KHKP50053 298 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 HILS1P60008 231 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ACTG1P63261 375 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 SLC35A1P78382 337 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 KCNJ10P78508 379 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ARF1P84077 181 aaKnown RBP3.9□□□□□ -1.79
CKS1B-207ENST00000477676 EGR4Q05215 589 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 CEACAM7Q14002 265 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 MAD2L1BPQ15013 274 aaPredicted RBP3.9□□□□□ -1.79
CKS1B-207ENST00000477676 OR7A5Q15622 319 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 SYPL1Q16563 259 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 KHDC1LQ5JSQ8 128 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 CFAP157Q5JU67 520 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 PHYHD1Q5SRE7 291 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 OTUD3Q5T2D3 398 aaPredicted RBP3.9□□□□□ -1.79
CKS1B-207ENST00000477676 IL23RQ5VWK5 629 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 SAXO2Q658L1 398 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 NHLRC1Q6VVB1 395 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF66Q6ZN08 573 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ZCCHC23Q6ZST2 131 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 CREB3L2Q70SY1 520 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 AAED1Q7RTV5 226 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 SPATA21Q7Z572 469 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 R3HCC1LQ7Z5L2 792 aaKnown RBP3.9□□□□□ -1.79
CKS1B-207ENST00000477676 MDP1Q86V88 176 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ANKRD46Q86W74 232 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 DDIASQ8IXT1 998 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 C4orf33Q8N1A6 199 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 KDM8Q8N371 416 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 GALNT4Q8N4A0 578 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 NANOGP1Q8N7R0 232 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 C3orf56Q8N813 242 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ANKFN1Q8N957 763 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF540Q8NDQ6 660 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 NUP37Q8NFH4 326 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 SGMS2Q8NHU3 365 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF563Q8TA94 476 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 AGR3Q8TD06 166 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 MAGEE2Q8TD90 523 aaPredicted RBP3.9□□□□□ -1.79
CKS1B-207ENST00000477676 WDR60Q8WVS4 1066 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 CKAP2Q8WWK9 683 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 XAGE5Q8WWM1 108 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 TMEM234Q8WY98 164 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 TMEM186Q96B77 213 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ROPN1LQ96C74 230 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 CCDC126Q96EE4 140 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ZHX1-C8orf76Q96EF9 292 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 SLC35G5Q96KT7 338 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 C1orf147Q96MC9 270 aaPredicted RBP3.9□□□□□ -1.79
CKS1B-207ENST00000477676 PTDSS2Q9BVG9 487 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 MRPL37Q9BZE1 423 aaKnown RBP3.9□□□□□ -1.79
CKS1B-207ENST00000477676 RAB1BQ9H0U4 201 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF442Q9H7R0 627 aa3.9□□□□□ -1.79
CKS1B-207ENST00000477676 ZMAT3Q9HA38 289 aaKnown RBP3.9□□□□□ -1.79
CKS1B-207ENST00000477676 EXOSC3Q9NQT5 275 aaKnown RBP3.9□□□□□ -1.79
CKS1B-207ENST00000477676 SERINC1Q9NRX5 453 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms