RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 TMEM207Q6UWW9 146 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 TSSK2Q96PF2 358 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 UHRF2Q96PU4 802 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 GINS3Q9BRX5 216 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 TMEM265A0A087WTH1 108 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 OR5K3A6NET4 321 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 NKAIN1Q4KMZ8 207 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 ZNF439Q8NDP4 499 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 LINC01599Q8WXQ3 324 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 PARP12Q9H0J9 701 aaKnown RBP10.08□□□□□ -0.8
VAPB-204ENST00000475243 THAP10Q9P2Z0 257 aaPredicted RBP10.08□□□□□ -0.8
VAPB-204ENST00000475243 MRPS2Q9Y399 296 aaKnown RBP10.08□□□□□ -0.8
VAPB-204ENST00000475243 DVL1O14640 695 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 LCMT2O60294 686 aaKnown RBP10.08□□□□□ -0.8
VAPB-204ENST00000475243 EIF1BO60739 113 aaKnown RBP10.08□□□□□ -0.8
VAPB-204ENST00000475243 CD14P08571 375 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 PIGAP37287 484 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 SRP9P49458 86 aaKnown RBP10.08□□□□□ -0.8
VAPB-204ENST00000475243 DVL1P1P54792 670 aaPredicted RBP10.08□□□□□ -0.8
VAPB-204ENST00000475243 SOWAHCQ53LP3 525 aaPredicted RBP10.08□□□□□ -0.8
VAPB-204ENST00000475243 RTN4RL1Q86UN2 441 aaPredicted RBP10.08□□□□□ -0.8
VAPB-204ENST00000475243 LILRA2Q8N149 483 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 OR51D1Q8NGF3 324 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 EPHX3Q9H6B9 360 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 GSK3AP49840 483 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 RIPPLY1Q0D2K3 151 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 SIAH3Q8IW03 269 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 KCNG3Q8TAE7 436 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 APEX1P27695 318 aaKnown RBP10.08□□□□□ -0.8
VAPB-204ENST00000475243 EPHA5P54756 1037 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 ACTBL2Q562R1 376 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 OTPQ5XKR4 325 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 S100A7AQ86SG5 101 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 ASB16Q96NS5 453 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 EVA1AQ9H8M9 152 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 HRH3Q9Y5N1 445 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 C17orf112F2Z3M2 114 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 GPRIN2O60269 458 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 SNAPINO95295 136 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 CR2P20023 1033 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 RAP2BP61225 183 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 CMPK2Q5EBM0 449 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 C1orf140Q5VVS0 124 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 L3MBTL4Q8NA19 623 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 GJC3Q8NFK1 279 aa10.08□□□□□ -0.8
VAPB-204ENST00000475243 UNC13CQ8NB66 2214 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 TMEM221A6NGB7 291 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 FOLR1P15328 257 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 AADACP22760 399 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 RFC3P40938 356 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 EIF1P41567 113 aaKnown RBP10.07□□□□□ -0.8
VAPB-204ENST00000475243 RAD52P43351 418 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 HBG1P69891 147 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 HBG2P69892 147 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 TLE1Q04724 770 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 Q499Y3 187 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 HENMT1Q5T8I9 393 aaKnown RBP10.07□□□□□ -0.8
VAPB-204ENST00000475243 MFSD12Q6NUT3 480 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 FAM3DQ96BQ1 224 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 HEYLQ9NQ87 328 aaPredicted RBP10.07□□□□□ -0.8
VAPB-204ENST00000475243 SMCO4Q9NRQ5 59 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 MED17Q9NVC6 651 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 SHISA7A6NL88 538 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 CLDN24A6NM45 220 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 OR8U8P0C7N1 319 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 PRKACAP17612 351 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 OR8G1Q15617 311 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 ARHGAP11BQ3KRB8 267 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 NKAIN4Q8IVV8 208 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 OR10K1Q8NGX5 313 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 SLC35A4Q96G79 324 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 ZBED3Q96IU2 234 aaPredicted RBP10.07□□□□□ -0.8
VAPB-204ENST00000475243 FGF22Q9HCT0 170 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 GPR173Q9NS66 373 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 FAM212BQ9NTI7 297 aaPredicted RBP10.07□□□□□ -0.8
VAPB-204ENST00000475243 ANKRD61A6NGH8 418 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 A8MVM7 634 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 PRRT4C9JH25 899 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 CD27P26842 260 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 WDR5BQ86VZ2 330 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 CCL4L1Q8NHW4 92 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 A0A096LPE4 126 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 A0A1W2PPZ6 126 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 MYF5P13349 255 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 GALEQ14376 348 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 GLIPR1L1Q6UWM5 242 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 H1FNTQ75WM6 255 aaPredicted RBP10.07□□□□□ -0.8
VAPB-204ENST00000475243 RNF170Q96K19 258 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 BARHL1Q9BZE3 327 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 ERVMER34-1Q9H9K5 563 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 EMC7Q9NPA0 242 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 B3GAT1Q9P2W7 334 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 PPP1R3CQ9UQK1 317 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 SCN1AP35498 2009 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 LRRC30A6NM36 301 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 CLEC2LP0C7M8 214 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 F2RP25116 425 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 PMPCAQ10713 525 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 HACD4Q5VWC8 232 aa10.07□□□□□ -0.8
VAPB-204ENST00000475243 LOC100289279A0A1B0GTE1 492 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms